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SR-VP_26_10_2019_C_20cm_scaffold_3048_7

Organism: SR-VP_26_10_2019_C_20cm-73-Thermoproteota-372_1

near complete RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 1 ASCG 34 / 38 MC: 1
Location: comp(5135..5437)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit F (RpoF) {ECO:0000313|EMBL:AIE98398.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AIE98398.1};; TaxID=1455970 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_05_G02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 96.0
  • Bit_score: 115
  • Evalue 2.20e-23
RNA polymerase Rpb4 n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KMK6_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 97.0
  • Bit_score: 115
  • Evalue 2.70e-23
RNA polymerase Rpb4 similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 97.0
  • Bit_score: 107
  • Evalue 2.10e-21

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Taxonomy

uncultured marine thaumarchaeote KM3_05_G02 → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 303
ATGCTCACCTTGAGCGAGGCGCATCAAATCCTAGAGAAGATCGACGTTGAGAAGGCCGACCAGATTCAGAAGAGGACCTTGGACTACACCTCAAAGTTCTCCAAGACCACGCCCGAGGTCGCGAAGAAGCTGAAGAAGCAGCTCGAGGTCGATTGCGGCCTGAGCGAAGGTGAGGCGACGGAAGTGGTAAACATCGTTCCAAAATCCATCGAAGAGCTCAGGACTTTCACCGCAGGCTGGAGGAAGCTCCTCCCGACTGAGACGCTGGAAAAGATACTCAAGATCCTAAAGTCCAAAGATTAA
PROTEIN sequence
Length: 101
MLTLSEAHQILEKIDVEKADQIQKRTLDYTSKFSKTTPEVAKKLKKQLEVDCGLSEGEATEVVNIVPKSIEELRTFTAGWRKLLPTETLEKILKILKSKD*