ggKbase home page

SR-VP_26_10_2019_C_20cm_scaffold_27283_8

Organism: SR-VP_26_10_2019_C_20cm-73-Thermoproteota-372_1

near complete RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 1 ASCG 34 / 38 MC: 1
Location: comp(4258..4839)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 193.0
  • Bit_score: 262
  • Evalue 5.70e-68
DNA-directed RNA polymerase, subunit E n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG60_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 183.0
  • Bit_score: 256
  • Evalue 1.50e-65
Tax=RBG_16_Thaumarchaeota_49_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 184.0
  • Bit_score: 274
  • Evalue 7.20e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Thaumarchaeota_49_8_curated → Thaumarchaeota → TACK → Archaea

Sequences

DNA sequence
Length: 582
ATGTTTCAGCTCGTAGAACTTGAAGACGTGGTCAGAGTCCCTCCTGACAAGTTTGGAAACTCGCTTGAGAACGTCGCGCTCGAGCTGCTCAAGCAGAAATACGAGAGCACGATCAGCCCCGAGAACGGCTACCTCGTCCTGGTAAGCAACGTCAAGGTCGACAAGATCGGGAAGATAATCCCCGGCGACGGTGCGACCTACCACAAGGTGAGGTTCCAGGTCCTCTCATTCTTCCCGCTGAAGCAGGAGATAGTCGAGGGCGAGATAGTGGAGATCACCGACTTTGGCGCTTTCGTGAGAATAGGCCCCACCGACGCCCTCCTCCACCTTTCCCAGATAATGGACGACTACCTCACCAGCGACGTAAAGTCGGGCGTCATCACCGCCTCCCAAAGCAAGAGGACCCTGAAGGTCGGGAGCAAGGTGAGGGTCAGGATAACCGCGGTCAGCCTGGGACACGGGATCTCGATGGGCAAGATAGGCGTGACGTGCAGGCAGCCCTTCCTCGGAGCGCTCGAATGGGTCGACGACGAGGTATCAAAGGCGCAGAAGCAGGCGAAGGCGGCCGTCCGGGCTGCGTAG
PROTEIN sequence
Length: 194
MFQLVELEDVVRVPPDKFGNSLENVALELLKQKYESTISPENGYLVLVSNVKVDKIGKIIPGDGATYHKVRFQVLSFFPLKQEIVEGEIVEITDFGAFVRIGPTDALLHLSQIMDDYLTSDVKSGVITASQSKRTLKVGSKVRVRITAVSLGHGISMGKIGVTCRQPFLGALEWVDDEVSKAQKQAKAAVRAA*