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RTP_07252018_0_1um_scaffold_16537_4

Organism: RTP_07252018_0_1um_Hydrogenophilales_62_9

near complete RP 46 / 55 MC: 5 BSCG 44 / 51 MC: 3 ASCG 13 / 38 MC: 5
Location: comp(2836..2982)

Top 3 Functional Annotations

Value Algorithm Source
lipid A export ATP-binding/permease MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] id=12498662 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 48.0
  • Bit_score: 90
  • Evalue 2.60e-16
lipid A export ATP-binding/permease MsbA similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 47.0
  • Bit_score: 87
  • Evalue 1.10e-15
Tax=RBG_16_Gallionellales_57_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 48.0
  • Bit_score: 90
  • Evalue 4.80e-16

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Taxonomy

RBG_16_Gallionellales_57_15_curated → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 147
GTCGCGCACCGGCTCTCCACCATTGAGCGCGCCAGCCGCATCGTGGTGCTGGAAGGCGGGCGCATCGTCGAAATCGGCAGCCATGCCGACCTGATCGCCAAGCAGGGCCGCTACGCGCAACTGCACGCGCTGCAGTTTTCCGCATGA
PROTEIN sequence
Length: 49
VAHRLSTIERASRIVVLEGGRIVEIGSHADLIAKQGRYAQLHALQFSA*