ggKbase home page

RTP_082018_0_1um_scaffold_739_4

Organism: RTP_082018_0_1um_Hydrogenophilales_65_12

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38
Location: 2256..2873

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 id=1308461 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 205.0
  • Bit_score: 404
  • Evalue 4.60e-110
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 205.0
  • Bit_score: 391
  • Evalue 1.50e-106
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 205.0
  • Bit_score: 404
  • Evalue 6.40e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGATTTGAGCGTCATTAACGACCAGGGTCAGCAAGTGACCAGCGTCGCAGCTTCCGACGAAACCTTCGGTCGCGATTACAACGAAGCGCTGGTGCATCAGGTGGTGACCGCGTTCCAGGCGAACGCCCGCAGCGGTAATCGTGCCCAGTTGACGCGTGCCGAAGTGACCGCCTCGACGCACAAGCCGTGGCGCCAAAAGGGTACCGGCCGCGCACGTTCCGGCCGTACCTCGAGCCCGATCTGGCGCGGGGGTGGTGTCACCTTCCCGAACAAGCCGAACGAGAACTTCACCCACAAGGTCAACCGCAAGATGTATCGCGCGGGCCTCGCGACCATCCTGTCGCAGCTGGCGCGCGAGGGCAAGCTCAAGGTGGTCGAGAGTCTGGGCATCGATTCGCCCAAGACCAAGCTGCTTGCCGGCAAGCTCAAGTCGATGGGTTTTGGCAAGGTCATGATCATTGCGGACAGTGTGGACGACAACCTGTGGCTGTCGTCGCGCAACCTGCCGAACGTCTACGTGGTCGAGCCGCATCAGGCCGATCCGTGGAGCCTGGTCAAATTCGGTAACGTGCTGATCACCAAGGCGGCGGTCAAGCAGTTTGAGGAGATGGTGTGA
PROTEIN sequence
Length: 206
MDLSVINDQGQQVTSVAASDETFGRDYNEALVHQVVTAFQANARSGNRAQLTRAEVTASTHKPWRQKGTGRARSGRTSSPIWRGGGVTFPNKPNENFTHKVNRKMYRAGLATILSQLAREGKLKVVESLGIDSPKTKLLAGKLKSMGFGKVMIIADSVDDNLWLSSRNLPNVYVVEPHQADPWSLVKFGNVLITKAAVKQFEEMV*