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RTP_11222018_0_1um_scaffold_425_14

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(11448..11927)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RIMM_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 159.0
  • Bit_score: 180
  • Evalue 1.10e-42
16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 159.0
  • Bit_score: 180
  • Evalue 3.10e-43
Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 159.0
  • Bit_score: 180
  • Evalue 1.50e-42

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGGTCGCATTGCGATCCCGTATGGTGTTAAGGGCTGGATGAAAATTCAGACTTTCACCGAGGCAGTGGATACCCTCGCAGACTATGCTGAATGGTATGTGAAGCGAGGTAATGATTGGCAAGTTTATACGGTTGCCAATGCTAAATTACATACTAAAAGTTTAGTTGCTGAACTAGTCGGTGTTGATGACAGAGACCAAGCGCTGGCATTGAAAGGGTGTGAAATTGCGGTGTTAAGCGATACGCTACCTGCTCCTGCTGAGGGTGAATACTACTGGTCTGATTTAATTGGATTGGCAGTAGTCAATGCGCGTGGCGATGCTTTTGGCAATATAGAAAAAATCCTCGAAGCGGGTGCGCATGATGTATTAGTAGTGCGTGGTACGCGTGAACATTTGATCCCGTTTGTTGGTAAGGTTGTGCAAAAAGTGGACTTGGACGCGAAAGCAGTCGTGGTCGATTGGGAGCTGGATTACTAA
PROTEIN sequence
Length: 160
MGRIAIPYGVKGWMKIQTFTEAVDTLADYAEWYVKRGNDWQVYTVANAKLHTKSLVAELVGVDDRDQALALKGCEIAVLSDTLPAPAEGEYYWSDLIGLAVVNARGDAFGNIEKILEAGAHDVLVVRGTREHLIPFVGKVVQKVDLDAKAVVVDWELDY*