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RTP_11222018_0_1um_scaffold_1161_12

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(7974..8789)

Top 3 Functional Annotations

Value Algorithm Source
Putative lipopolysaccharide core biosynthesis glycosyl transferase LpsC {ECO:0000313|EMBL:CBI09583.1}; EC=2.-.-.- {ECO:0000313|EMBL:CBI09583.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 272.0
  • Bit_score: 471
  • Evalue 4.30e-130
Putative lipopolysaccharide core biosynthesis glycosyl transferase LpsC n=1 Tax=mine drainage metagenome RepID=E6QQR2_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 272.0
  • Bit_score: 471
  • Evalue 3.10e-130
lipopolysaccharide core biosynthesis glycosyl transferase (KdtX) similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 266.0
  • Bit_score: 283
  • Evalue 4.40e-74

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 816
ATGGAAAAACTATCTGCTTTTGTCACCACTTTTAACAATGACCGCACCTTAACCAGTTGTCTGGAGAGCGTTAAATGGGCAGATGAAATTGTTTTACTGGATTCCGGCAGCACAGATAAAACGTTGGCAATTGCCGAACAATATGGTTGTCGAATTTTCCACCACCCTTTTTTGGGCTACGGCAAACAAAAGCAACTCGCGCTCACGAAAACCACGTATCTGTGGGTATTGTTACTGGATGCCGATGAAGCACTGTCTCCTGAAGCGCAACAAGAAATCCGCGAAACACTTAATCAACCCACAGCAGATGGATACGATATTTCCCGTTTAGAACAAATGTTCTGGCGTATGAATAATCAACACACCCGCCTCAATAAATTTTTGCGTTTATTTCGTAAGGATAAAGGACATATTACCGACATGCCCATACACGCCGCGCCTAAAGTCGATGGTGTGATTAAAAGCCTGAACGCTGTATTTTACCACTATGGTGAGACGGATATTGATGTCAAAGTCAGTAAATTAAATGCGTATTCTACGGGATTGGTAAAAGACAAAGTAGCCAAAGGCACTCGCCCTAATCCCTGGATGCTGGTGTTTTACCCACCTTTTTATTTTTTACGTGCCTATTTCTTCAAGCGGGCTTTTATGAATGGCTGGGGTGGTTTTATCACTTCATTCTGTGGTGCATTTTATGTGTTTCTGAAATATGCCAAGTTATACGAATATCATCAGCGCAAACGCTATGGTAAATCCATGATGCCGATGGGTGCACCTGATAATCCACCTGTTTATGAGTCCGACAAACCTTGCTGA
PROTEIN sequence
Length: 272
MEKLSAFVTTFNNDRTLTSCLESVKWADEIVLLDSGSTDKTLAIAEQYGCRIFHHPFLGYGKQKQLALTKTTYLWVLLLDADEALSPEAQQEIRETLNQPTADGYDISRLEQMFWRMNNQHTRLNKFLRLFRKDKGHITDMPIHAAPKVDGVIKSLNAVFYHYGETDIDVKVSKLNAYSTGLVKDKVAKGTRPNPWMLVFYPPFYFLRAYFFKRAFMNGWGGFITSFCGAFYVFLKYAKLYEYHQRKRYGKSMMPMGAPDNPPVYESDKPC*