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RTP_11222018_0_1um_scaffold_4475_12

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 11245..12129

Top 3 Functional Annotations

Value Algorithm Source
type II secretory protein GspE n=1 Tax=Thiobacillus thioparus RepID=UPI00036CA70B similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 288.0
  • Bit_score: 380
  • Evalue 7.80e-103
type IV pilus assembly protein, PilB similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 295.0
  • Bit_score: 375
  • Evalue 1.20e-101
Type IV pilus assembly protein, PilB {ECO:0000313|EMBL:BAN36272.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 295.0
  • Bit_score: 375
  • Evalue 6.00e-101

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Taxonomy

Sulfuricella denitrificans → Sulfuricella → Sulfuricellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGCCTCAAATCCAACTCCTATCATTTTAACTGGTCTCGCCCGTGCCTTAGTTACCCAGCAATGGCTAACTAATGAAGAAGCTGAGACGGTGATGAAAGACGCTAAAGCCAGTAACGAGCATTTTGTCACCAGTTTTGTCAAAAGCAAAAAAATCGCCCCCGTTAAACTCGCCGAATTTGCCGCAGTTCAATTTGGTTTCCCGTATTTTGACTTAAATGCCATTGATCACGAGACCATCCCCAGCAAACTATTAGATAGTAAGCTAATGCAAAATCGGCGTGTGGTTGCTCTATATCAACGGGGTAGCAAACTAACCATAGGCTTGTCTGATCCTACTAACCTGCAAGCCATCGACGAAATCAAATTCCAAACGTCGCTTACCGTTGATGTCATTGTAGTTGAAGACGACAAACTGGGTCGCTTAATTACTCAAATCAGCGAAAGCAATAACAACACCATCGCCAACTTAGTGACTGACGATGATATAGAATTAGATTTTACTGACGATACTGCTCTTGCTACCAAAAACACTGAAGATACTCAAGAAGTGGATGACGCTCCCATTGTGCGCTATCTGCAAAAAATACTACTAGATGCTATCAACGACGGTGTATCCGATATACACTTTGAACCCTACGAAAAATACTACCGCATACGTTATCGTTTAGACGGCATACTGCGTGAAATCGCACAACCACCCCTAGCAATCAAAGACAAACTTTCATCACGCATCAAAGTTATTTCCAAGCTAGACATATCAGAAAAACGCGTTCCGCAAGATGGTCGCATGAAGCTGGTCTTATCGAAAAACCGTGCCATTGATTTCCGTGTCAGCACCCTGCCGACACTGTATGGTGAAAAAATAGTAATGCGCATCCTGGAT
PROTEIN sequence
Length: 295
MASNPTPIILTGLARALVTQQWLTNEEAETVMKDAKASNEHFVTSFVKSKKIAPVKLAEFAAVQFGFPYFDLNAIDHETIPSKLLDSKLMQNRRVVALYQRGSKLTIGLSDPTNLQAIDEIKFQTSLTVDVIVVEDDKLGRLITQISESNNNTIANLVTDDDIELDFTDDTALATKNTEDTQEVDDAPIVRYLQKILLDAINDGVSDIHFEPYEKYYRIRYRLDGILREIAQPPLAIKDKLSSRIKVISKLDISEKRVPQDGRMKLVLSKNRAIDFRVSTLPTLYGEKIVMRILD