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RTP_11222018_0_1um_scaffold_4712_2

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(2145..3449)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase {ECO:0000313|EMBL:CBI10396.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBI10396.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 441.0
  • Bit_score: 657
  • Evalue 8.90e-186
ATP-dependent RNA helicase n=1 Tax=mine drainage metagenome RepID=E6QT24_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 441.0
  • Bit_score: 657
  • Evalue 6.40e-186
DEAD/DEAH box helicase domain protein similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 466.0
  • Bit_score: 628
  • Evalue 1.20e-177

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 1305
ATGTCATTTGCTACCCTAGGCTTATCCGAAGCCATTGTCCGTGCGGTTACTGAGCGCGGTTACACCGAACCTACCCCTATTCAGGCGCAAGCTATCCCTACCATCATGACAGGCGGCGATTTGCTGGGCGGTGCCCAAACGGGCACAGGCAAAACCGCTGGTTTTGTATTGCCTATCTTGCATCGCTTATCAACGCTTCCTGCTAAATCGACTGATCGTGCACCCATACGCGCATTGATACTGACGCCTACCCGCGAACTTGCAGCGCAAGTGGAAGAAAGCGTGCGTGAGTATGGTAAATACTTGCCACTCAAATCGATGATGATGTTTGGTGGTGTCAACATCAATCCACAAATCCAGAAGCTGCGTGGACGTGTAGATATTCTAGTTGCCACCCCTGGTCGTTTACTTGACCACGCACAACAGCGCACTGTGGATTTATCGCACGTTGAAATATTGGTACTCGACGAAGCCGATCGCATGCTGGACATGGGCTTTATCCGCGACATCAAGAAAATCATGGCGCTTATTCCTAAACAACGTCAAACACTGCTGTTCTCAGCGACGTTCTCTGATGAAATCAAAGCGCTGGCAGATAACTTACTGATCAAACCTACCACTGTCGAAGTTGCACGCCGCAACGCCACCAACACCCTGATTTCGCAAAAAGCCTATGCGGTTGACCGTGAGCGCAAGCGTGAATTGCTAACCAAGCTGATTAAAGATAATAACTGGTTTCAAGTTTTGGTATTCACTCGTACCAAGCATGCCGCTAACCGCCTTGCCGAGAACCTCGACAAAGACGGCATTCCTGCCATGGCAATACACGGCAACAAGAGCCAGGCTGCACGCACCCGTGCGCTCAAAACGTTCAAAGATGGTACGCTGCAAGTGCTGGTCGCCACGGACATCGCCGCACGCGGTATCGACATCAGCGAACTACCGCACGTAGTCAATTTTGAATTGCCTAACGTCGCTGAAGATTACGTTCACCGTATCGGTCGTACGGGTCGCGCAGGCAGTGAAGGTGAAGCGACTTCATTAGTATGCGTAGATGAACTCAAACTACTCACTGCCATCGAACGCCTGACCAAAACCCAAATCATCGCTGAAGTATTCCCAGGCTTTGAAGTGGATCCGCGCATCCAGGCTGAGCCTATTTTGAATGGCAGTCAACGCACCGCTGGTGGCGGAGGTGGTGGACAAAACCGTCGCCCAGCCGCAGGCAACGGCGCACGTCCAGCCGCTAAACCAGCAGCACGCACACCAAGCAGCCCGCACCGTACTGGCGGACGCGGGCGGTAG
PROTEIN sequence
Length: 435
MSFATLGLSEAIVRAVTERGYTEPTPIQAQAIPTIMTGGDLLGGAQTGTGKTAGFVLPILHRLSTLPAKSTDRAPIRALILTPTRELAAQVEESVREYGKYLPLKSMMMFGGVNINPQIQKLRGRVDILVATPGRLLDHAQQRTVDLSHVEILVLDEADRMLDMGFIRDIKKIMALIPKQRQTLLFSATFSDEIKALADNLLIKPTTVEVARRNATNTLISQKAYAVDRERKRELLTKLIKDNNWFQVLVFTRTKHAANRLAENLDKDGIPAMAIHGNKSQAARTRALKTFKDGTLQVLVATDIAARGIDISELPHVVNFELPNVAEDYVHRIGRTGRAGSEGEATSLVCVDELKLLTAIERLTKTQIIAEVFPGFEVDPRIQAEPILNGSQRTAGGGGGGQNRRPAAGNGARPAAKPAARTPSSPHRTGGRGR*