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RTP_11222018_0_1um_scaffold_4803_1

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(1..297)

Top 3 Functional Annotations

Value Algorithm Source
Putative HTH-type transcriptional regulator n=1 Tax=Osedax symbiont Rs2 RepID=S6HZV2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 83.0
  • Bit_score: 118
  • Evalue 2.40e-24
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:EPJ53084.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 83.0
  • Bit_score: 118
  • Evalue 3.40e-24
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 92.0
  • Bit_score: 98
  • Evalue 7.30e-19

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Taxonomy

Osedax symbiont Rs2 → Oceanospirillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGAAGACAAAAACGCTTGCTCCCGTTCAAACCCTTACGTTAACAGGTGATTGCGACCGTACATGCCCGGTGCAACGAACGGCAAAAATTTTGGATGGCAAATGGACGACTTTGATCGTGCGCGATTTGATTGGCGGCAAAAAACGCTATTCGGAGTTGCAACGCAGCCTGTCGGGAATCAGTCCGCGTTTATTGGCAGCACGATTACGCTTGCTGGAGGAGCACAGTATGTTGACCCGCACAGTCTATCCGACTGTTCCACCCACTACCGAATATGAGCTGACATCGTTGGGGCAT
PROTEIN sequence
Length: 99
MKTKTLAPVQTLTLTGDCDRTCPVQRTAKILDGKWTTLIVRDLIGGKKRYSELQRSLSGISPRLLAARLRLLEEHSMLTRTVYPTVPPTTEYELTSLGH