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RTP_11222018_0_1um_scaffold_4551_4

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(3105..4622)

Top 3 Functional Annotations

Value Algorithm Source
organic solvent tolerance transmembrane protein; K04744 LPS-assembly protein id=12496568 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 505.0
  • Bit_score: 555
  • Evalue 4.00e-155
organic solvent tolerance transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 503.0
  • Bit_score: 536
  • Evalue 5.40e-150
LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 503.0
  • Bit_score: 536
  • Evalue 2.70e-149

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ACGGAATTTAGTATTCCATATTACTGGAATATCGCGCCAAATTACGATGCTACCATTACACCCCGGGTGATGACTAAGCGCGGTGCGCAAATAGGGGCTGAGTTCCGTTATCTCACCGACACTTATCGTGGCATTTTGGACGGCGATTTTTTGTCTGATACGCAAACACTGACTAACCGTTGGCGTTTTTTTGGTACCCATGATCAAAATTTTGCGCCTGGGGTGGTGGGACGTTTTGTTTATCAAACCGTGTCGGATAATGATTACTTCCGTGATTTATCCAACAAGGTTAGTGCCACCTCGCTGACCAACTTAAATCAAGAAGCGCTGGTGAGTTATCAGGCTAGCTGGTGGCGTGCCGCAGCCAGAGTGCAACAATACCAAACCTTGCAAGACCCGAATGCACCAGTTATTCCGCCTTATAAGCGGCTGCCGCAGCTGACTTGGCAAGCTGCGCACAGTAGTGATAATGGCATGGATGTGAATGTGAATACCGAGCTTACACGGTTTGATCATCCCACCTTACTCACTGGTACACGGTTAGTTGCATACCCGAGTGTGGCCATGCCCTTGATTAACCAATTTGGTTTCATTACGCCCAAAATGGGTGTGCACTACACTAATTATTTACTAAATTCTACGCCCGCAAACCCTGCGGAAAATAGCACGCGCACTTTGCCGATTATGAGTGTAGACAGTGGTATATATTTTGATCGTAATGTGGACTGGTTTGGCGGAAACTATCAACAAACACTAGAGCCACGGGCTTACTACGTTTATGTGCCATACAAAGACCAAAGCACCCTGCCTAATTTCGATAGCGCGGAAATGGACTTAAATTATGCGCAACTCTTTACTGAAAATCGTTTTATCGGTAATGACCGTATCAACAACGCAAATCAACTAACGTTGGCAATGACATCGCGTTTTCTGGACACCGCAACAGGCTTGGAACGACTACGTTTTGCGGTGGGTCAGCGCTTCTATTTTACGCCGCAAAAAGTCACGCTGCCTAATGGGGTTGTGAACAATAACACCAGCAGCGATCTGCTCGCCTCAGTGGGTGGGCAAATCACTTCAGCTTGGCGCGCCGAAGCCGCTATTCAATATAACACGCTGCTTAATCAGACTGTGCGCAACAGCTTTAGCGCTAGTTATCGTCCAGCGCCTGGCAAGGTTGTGAATTTCAGCTACCGCACCATTAGCGGTGAAATCAATCAAGTTGACTTGTCAGCACAATGGCCTATTGCCCCTCGCTGGTATGGTATGGCGCGGTATAACTATTCGTTGCTGGACAAACGTGTGGTTGAAGGTTTGGCTGGGTTGGAATACAACGGCGGTTGTTGGGCTGCACGCGGTGTATTCCAGACCATTGCTACCGCAGCGAATGTCACCAGTACTTCATTTTTCATCCAATTAGAATTGAACGGACTAGGGCGGTTAGGCTCTAATCCACTCGATGCCCTCAAACTTAGCGTGCCTGGATATACTAACTCCAATGAAATCACTCAACCTTAA
PROTEIN sequence
Length: 506
TEFSIPYYWNIAPNYDATITPRVMTKRGAQIGAEFRYLTDTYRGILDGDFLSDTQTLTNRWRFFGTHDQNFAPGVVGRFVYQTVSDNDYFRDLSNKVSATSLTNLNQEALVSYQASWWRAAARVQQYQTLQDPNAPVIPPYKRLPQLTWQAAHSSDNGMDVNVNTELTRFDHPTLLTGTRLVAYPSVAMPLINQFGFITPKMGVHYTNYLLNSTPANPAENSTRTLPIMSVDSGIYFDRNVDWFGGNYQQTLEPRAYYVYVPYKDQSTLPNFDSAEMDLNYAQLFTENRFIGNDRINNANQLTLAMTSRFLDTATGLERLRFAVGQRFYFTPQKVTLPNGVVNNNTSSDLLASVGGQITSAWRAEAAIQYNTLLNQTVRNSFSASYRPAPGKVVNFSYRTISGEINQVDLSAQWPIAPRWYGMARYNYSLLDKRVVEGLAGLEYNGGCWAARGVFQTIATAANVTSTSFFIQLELNGLGRLGSNPLDALKLSVPGYTNSNEITQP*