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RTP_11222018_0_1um_scaffold_25779_2

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(567..1505)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rRNA mA1618 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; rRNA adenine N-6-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 314.0
  • Bit_score: 371
  • Evalue 9.20e-100
ribosomal RNA large subunit methyltransferase F (EC:2.1.1.48) similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 313.0
  • Bit_score: 357
  • Evalue 2.80e-96
16S rRNA methyltransferase n=1 Tax=Pseudomonas sp. S9 RepID=UPI00025568D6 similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 309.0
  • Bit_score: 366
  • Evalue 1.60e-98

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Taxonomy

Pseudomonas taeanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGGCTATTGATCATCCCAAATTTCATCCGCGTAACCGCCACCAGGGTCATTATGACTTTCCACAGTTAATCCTAGCAGAAGCAACGCTAATCGATTTCGTCAGTGTAAATACGCACGGCATCACCACTATTGACTTTGCCAATCCAGTTGCTGTAAAAACGCTCAATCGCGCGTTACTCAAAACGCATTATGGTATTACCTCGTGGGATATTCCACCCGATTACTTATGCCCAGCCGTACCCGGTCGCGCAGATTACCTGCATTATCTGGCCGATCTTTTAACAAGCAGCAACGCAGGGAAAATGCCAAAACATATACAGGCACTTGACATAGGTACAGGCGCAAACTGCATTTATCCATTAATTGGTCAAAGCCAATACAACTGGCAATTCGTCGCTACCGATAGCAACCCGATCGCATTAAACAATGCACAAACCATACTGAACCATAACCCCAAGGCAGCACAACACATCAAACTACGCTTACAAACCGACTCCAATGCAATTTTTAGCAATATCATCCTTGACAATGAATGGTTTGACGTTACCCTCTGCAACCCACCTTTCCATGCATCTAAAGCTGAGGCTAGTGCCGGCACGCAACGAAAATGGCGTAATTTAGGTAAACAGCTTAATCAAAGCGAGTCCACTTTGAATTTTGGTGGACAGGATATGGAACTCTACTGCACAGGCGGTGAACTCACATTCATACTACGCATAATAGCGGAAAGCGCTAAGCTCTCTACGCGCTGCTTTTGGTTTACCACGCTGGTATCCAAATCAGCTAACTTGCCAAAAATCTACGCTGCACTCAAACACGCAGGCGTAGATCAGCTGCTAACTGTCACTATGGAGCAAGGACAAAAACAAAGCCGTTTTCTGGCTTGGACGTTCCTAACATCGAGCCAGAAAACAGCCTGGCGCAAGCTACGATGGTGA
PROTEIN sequence
Length: 313
MAIDHPKFHPRNRHQGHYDFPQLILAEATLIDFVSVNTHGITTIDFANPVAVKTLNRALLKTHYGITSWDIPPDYLCPAVPGRADYLHYLADLLTSSNAGKMPKHIQALDIGTGANCIYPLIGQSQYNWQFVATDSNPIALNNAQTILNHNPKAAQHIKLRLQTDSNAIFSNIILDNEWFDVTLCNPPFHASKAEASAGTQRKWRNLGKQLNQSESTLNFGGQDMELYCTGGELTFILRIIAESAKLSTRCFWFTTLVSKSANLPKIYAALKHAGVDQLLTVTMEQGQKQSRFLAWTFLTSSQKTAWRKLRW*