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cn_combo_scaffold_3887_11

Organism: CN-SCN_Rhodospirillales_16x

near complete RP 42 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: comp(8570..9454)

Top 3 Functional Annotations

Value Algorithm Source
appC; Oligopeptide transport system permease protein appC (EC:3.6.3.24) similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 289.0
  • Bit_score: 346
  • Evalue 7.80e-93
ABC transporter membrane spanning protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JIL9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 289.0
  • Bit_score: 378
  • Evalue 6.60e-102
oppC2; putative oligopeptide transport system permease protein oppC (ABC superfamily, membrane) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 292.0
  • Bit_score: 495
  • Evalue 4.00e-137

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGACCCGTGGCTGGAGCCGTTTGCGGCGTCATCATCTGGCGCGCGCGTCTTTGATCTTCCTGATCGTCATCATGGTGCTGTCGCTCGCCGCCCCGCTGATCGCGGAGCTGCGCGGCGTCGATCCCACGCAGACCGACCTGTTCCGCCGCTTCGAGCCGCCCTCGGCCGCGTACTGGCTCGGCACCGACGATGTCGGCCGCGATCTCTTCCAGCGCCTGCTCGACGGCGGCCGGGTGTCTCTTCTGGTTGGCCTTGCCGGTGCTCTTCTCTCGGGCCTGCTCGGTGCGCTGATCGGCGTCGCGGCCGGCTATCTCGGCGGCAGGCTCGATGCCTTCCTGATGCGCTTCACCGACGGCGTGATCGCCCTGCCCCTGCTGCCTCTGCTGATCGTCGTAGCCGCGATCGATCCACGAAAGCTCGGCGTGCCGGCCGAGCTGGCCCAGTCGGAAGCCTTCTCGCTCTATCGCATCGTCGTGATCATCGCGCTTACGGGCTGGACGACGGTCGCGCGACTGGTGCGCGCCGAAACGTTGTCGCTCAAGGCGCGCGACTTCTCGCGGGCGGCGCAGGCGCTGGGTGCTCGTCCAGTCCGCATCATGTTGCGCCATATCCTGCCGAACACGGCAGGATCCCTGATCGTCGCCACGACGATCTCGATGGGCACGCTCATCTTGCTCGAGTCGACCCTTTCCTTCCTAGGCCTCGGCATCCAGCCGCCGGCTGCGAGCTGGGGCAACATGCTGACCGGCGCGCAGGAGCTTTTGCAGGAAGCGCCCTTGCTGGCGCTGTGGCCCGGCCTTCTCATTTTCCTGACCGTGATCGCCTTCAATTTCCTTGGAGACGGTTTGCAGGATGCCCTCGACCCAAGAAGCGAGAGACGCTGA
PROTEIN sequence
Length: 295
MTRGWSRLRRHHLARASLIFLIVIMVLSLAAPLIAELRGVDPTQTDLFRRFEPPSAAYWLGTDDVGRDLFQRLLDGGRVSLLVGLAGALLSGLLGALIGVAAGYLGGRLDAFLMRFTDGVIALPLLPLLIVVAAIDPRKLGVPAELAQSEAFSLYRIVVIIALTGWTTVARLVRAETLSLKARDFSRAAQALGARPVRIMLRHILPNTAGSLIVATTISMGTLILLESTLSFLGLGIQPPAASWGNMLTGAQELLQEAPLLALWPGLLIFLTVIAFNFLGDGLQDALDPRSERR*