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cn_combo_scaffold_4030_12

Organism: CN-SCN_Rhodospirillales_16x

near complete RP 42 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: comp(12719..13507)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 262.0
  • Bit_score: 397
  • Evalue 1.30e-107
tRNA pseudouridine synthase A n=1 Tax=alpha proteobacterium BAL199 RepID=A8TUC9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 246.0
  • Bit_score: 312
  • Evalue 4.00e-82
pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 253.0
  • Bit_score: 302
  • Evalue 8.90e-80

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
GTGCCGCGCTACAAGCTCACCATCGAGTATGACGGCGAGCCCTTCGTCGGCTGGCAGCGCCAGGAAAACGGTCTTTCTGTACAGGGTGCACTCGAGGACGCCGTCTTCGCCTTCTGCGGCGAACGCGCCGTCGTCGTCGGTGCCGGCCGCACCGATGCCGGCGTCCATGCCCGCGGACAGGTAGCCCATATCGATCTCACTGGCGAGAAATCCGCCGAGACCGTGCGGTCCGCCCTCAACTTTCATCTGAAACCGCATCCGGTCGCCGTCGTGCAGGCCGAACCCGCGACGGCGGATTTCCACGCACGTTTCTCGGCGACCTGGCGACGCTATCGCTATCGCATCCTCAATCGCCGAGCGCCGCCCGCCCTCGATCGCGGCCAGCTCTGGCATGTTCCCGTACCGCTCGACGTCGAAGCGATGGCCGATGCGGCGTCGGCGCTGCTGGGCCACCACGACTTCAACAGCTTTCGCTCGACCTCCTGTCAGGCGCTCTCGGCCCTGAAGACCCTGGATTTGCTCACCGTCAGTCGAAACGGCGACGAGATCACGCTCGACGTCGGCGCCCGCTCCTTCCTGCACAATCAGGTACGCATTCTGGCCGGCACGCTCCAGCTCGTGGGCCGCGGCCAATGGAGCCGCCGCGACGTCGAACAGGCGCTGGCAGCCCGCGACCGCACGCGCGCCGGCCCGACGGCGCCGCCTCAGGGCCTCTGCTTCATGGAGGTGCGCTACGATCTAGGCGCCAATAGCCGGGGTGATCCCGAGGAAACGGTCGACGATCACTGA
PROTEIN sequence
Length: 263
VPRYKLTIEYDGEPFVGWQRQENGLSVQGALEDAVFAFCGERAVVVGAGRTDAGVHARGQVAHIDLTGEKSAETVRSALNFHLKPHPVAVVQAEPATADFHARFSATWRRYRYRILNRRAPPALDRGQLWHVPVPLDVEAMADAASALLGHHDFNSFRSTSCQALSALKTLDLLTVSRNGDEITLDVGARSFLHNQVRILAGTLQLVGRGQWSRRDVEQALAARDRTRAGPTAPPQGLCFMEVRYDLGANSRGDPEETVDDH*