ggKbase home page

cn_combo_scaffold_4163_3

Organism: CN-SCN_Rhodospirillales_16x

near complete RP 42 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: comp(1887..2582)

Top 3 Functional Annotations

Value Algorithm Source
lysine exporter protein (LYSE/YGGA) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 231.0
  • Bit_score: 413
  • Evalue 1.60e-112
Putative LysE/RhtB family amino acid efflux pump id=4956289 bin=GWC2_Methylomirabilis_70_16 species=Oscillatoria sp. PCC 6506 genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 207.0
  • Bit_score: 162
  • Evalue 5.80e-37
lysine exporter protein (LYSE/YGGA) similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 205.0
  • Bit_score: 161
  • Evalue 2.80e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGCAGGTTCCGGGCTTCGTGTTCAATCCAATCGGGATCGCCATCGAGGGGGCGGTCATCGGCTTTTTGATCGCCGTCCCCGTGGGACCGGCCGCCGCCCTCTGCATTCGCCGCTCCATCACCGTCGGCGCCATGGCAGGCTACATGACCGGGATCGGCGCCGCCCTGGGCGATGCCGTGTTCGGCGCCGTCGCGGCGTTCGGCCTGTCGTTCGTTCAGACCTTCGTCGCCGAACACGAAGCGTGGCTGCTCGGCCTCGGCGGCATCGTACTGGTGATCATGGGATGGACGACGATGCGACACCGGCCGCGCAATGTCGGCGATCCGGTGGCCGACGACCGCGAGCATCGGCTCTCGACGCATTTCCATTATGCGACGTCGAGCTTCTTCATCACCGTGTTCAATCCGCTGACCGTGATGGCCTTCGGCGCGGCCTTCGCCGGCCGCAATCTCGCCGGCGTCGGTGGCAGCCTGCCCGACGCGTCGCTGCTGGTCGCCGCCGTGTTCTGCGGCGCGCTCGCCTGGTGGACGATCATCTGCACGGCATCGGTGGCGCTTCGGGCGCGCTTCACCGGCACCGGCATGCTGTGGCTCAACCGCTGCTCGGGCGCGGTGATCCTGGGCTTCGGCGTTGCCGCCCTGATTTCGCTGCTGCCGCTGCCGTGGAAGCAGATCGGCCGGACGCTCGGCGTCTGA
PROTEIN sequence
Length: 232
MQVPGFVFNPIGIAIEGAVIGFLIAVPVGPAAALCIRRSITVGAMAGYMTGIGAALGDAVFGAVAAFGLSFVQTFVAEHEAWLLGLGGIVLVIMGWTTMRHRPRNVGDPVADDREHRLSTHFHYATSSFFITVFNPLTVMAFGAAFAGRNLAGVGGSLPDASLLVAAVFCGALAWWTIICTASVALRARFTGTGMLWLNRCSGAVILGFGVAALISLLPLPWKQIGRTLGV*