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cn_combo_scaffold_5246_2

Organism: CN-SCN_Rhodospirillales_16x

near complete RP 42 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: comp(612..1244)

Top 3 Functional Annotations

Value Algorithm Source
Smr protein/MutS2 n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B71B5D similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 188.0
  • Bit_score: 108
  • Evalue 1.20e-20
Smr protein/MutS2 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 190.0
  • Bit_score: 256
  • Evalue 3.80e-65
DNA mismatch repair protein MutS similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 190.0
  • Bit_score: 107
  • Evalue 4.40e-21

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGGGCTGTGTAGACCTGCCCCACGGGCAAGGCTACACGAAAACCCCCATGGTCAGAAATACGGTCAAGGACGCCGATCTGTTCGCCGCGGCGATGGCCGACGTGAAGCCGCTCGACAAGAAGCGGCGGACCGCAAGCCTCGTTGCGCGCGTCGTTCCGAAGCCGAAAGCAGAGGTACCGGCAAAGCCCAAGGCCAGGGTTCTTCCATCGGTGCCATCCCGGGTGGCAAAGGTGCCGGAACTGAGCTCCGACGACCGGACGTTCGACCGGGATGTTTCACGCGCCCTGTCCCGACGCCGGCTGTCGCCCGAGGCTTCGCTCGACTTGCACGGCATGACGCTCGCGGCGGCAGAGCAGGCCGTCGGCCGGTTCCTCTCGCGAGCGGCCGACCGCGACCTCAGGGTAGTGCTGATCGTGACGGGGAAAGGGCTGCGCAAGGAAAGCGGCCGCCTGATCGGTGGCCGCATCCGGTCGGAATTCGTGGGCTGGCTCAACCGCGCCGACAACCGGGCCTATGTGCGGGCGGTCCGATCGGCCCACGCCCACCATGGCGGCAGCGGTGCGTTCTACCTGTTGTTGCGCCGCCGTTCCTCGGCCAAGAGCCGTTCCTTGCGCGCCACGCCCCAGCGATAG
PROTEIN sequence
Length: 211
MGCVDLPHGQGYTKTPMVRNTVKDADLFAAAMADVKPLDKKRRTASLVARVVPKPKAEVPAKPKARVLPSVPSRVAKVPELSSDDRTFDRDVSRALSRRRLSPEASLDLHGMTLAAAEQAVGRFLSRAADRDLRVVLIVTGKGLRKESGRLIGGRIRSEFVGWLNRADNRAYVRAVRSAHAHHGGSGAFYLLLRRRSSAKSRSLRATPQR*