ggKbase home page
Advanced Search
Search Help

cn_combo_scaffold_6303_6

Organism: CN-SCN_Rhodospirillales_16x

near complete RP 42 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: comp(4380..8552)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 999.99
  • Bit_score: 2194
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NS32_AZOS1 similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 999.99
  • Bit_score: 2194
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 999.99
  • Bit_score: 2194
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azospirillum lipoferum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4173
ATGACCGACCTCATCAACGTACTAGGCCAGCCGCAGGGCACGCCGACCTTCGACGAGATCCGCATCTCGATCGCCAGCCCCGAGCGCATCCGCACCTGGAGCCACGGCGAGATCAAGAAGCCGGAGACCATCAACTACCGCACGTTCAAGCCGGAGCGTGACGGGCTGTTCTGCGCCCGCATCTTCGGACCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCATGAAGTTCCGCGGCATCACCTGCGAGAAGTGCGGCGTCGAGGTGACGCTCACCAAGGTGCGCCGCGAACGGATGGGCCACATCGAGCTCGCCTCGCCGGTGGCGCACATCTGGTTCCTGAAGTCGCTGCCGAGCCGCATCGGCCTGCTGCTCGACATGACGCTGCGTGATCTCGAGAAGATCCTCTACTTCGAGAACTACGTCGTCACCAACCCCGGCCTGACCGCACTCAAGTATCGCGAGCTCCTGAACGAGGACCAGTACCTCAACGCGCTCGACGAGTACGGCGATGGCTCCTTCGAAGCCGAGATCGGCGCCGAGGCGATCCGCGCCATGTTGCAGGCGATCGACCTCAACGAGGAGCGCCCGCGCCTTCGCGAGGAGCTGCGCGAGACGACCTCCGAGGCCAAGCGCAAGAAGCTCGTGAAGCGCCTGAAGCTCTGCGAGAACTTCATCGAATCCGGCGCACGTCCGGAGTGGATGATCCTCGAGCTGGTGCCGGTGATCCCGCCCGAGCTGCGCCCGCTGGTGCCGCTCGACGGCGGCCGCTTTGCCACGTCCGACCTGAACGACCTCTATCGTCGCGTGATCAACCGTAACAATCGGTTGAAGCGCCTGATGGAGTTGCGCGCTCCCGACATCATCGTGCGCAACGAGAAGCGCATGCTGCAGGAGTCGGTCGATGCGCTGTTCGACAACGGCCGTCGCGGCCGCGTCATCACGGGCGCCAACAAGCGTCCGCTGAAGTCGCTCAGCGACATGCTCAAGGGCAAGCAGGGCCGCTTCCGTCAGAACCTGCTCGGCAAGCGCGTCGACTACTCTGGCCGCTCGGTCATCGTGGTCGGTCCGGAGCTCAAGCTGCACCAGTGTGGTCTACCCAAGAAGATGGCGCTCGAGCTGTTCAAGCCGTTCATCTACTCGCGGCTGCAGAACTACGGCATGGCCAACACCATCAAGGCCGCCAAGCGCATGGTCGAGAAGGAGCGGCCGGAGGTGTGGGACATTCTCGAGGAGGTCATCCGCGAGCATCCCGTCCTGCTGAACCGCGCGCCGACCCTGCACCGCCTCGGCATCCAGGCCTTCGAGCCGGTGCTGATCGAGGGCAAGGCGATCCAGCTCCATCCGCTGGTCTGCACGGCCTTCAATGCCGACTTCGACGGCGACCAGATGGCGGTGCACGTGCCGCTGTCGCTGGAAGCCCAGCTCGAAGCGCGCGTGTTGATGATGTCGACCAACAACATCCTCTCGCCCGCCAGCGGCAAACCGATCATCGTGCCGTCGCAGGACATCGTGCTCGGCATCTACTACATCACGCTCGAGCGCGAGGGTGAGCCCGGCGAAGGCTCGCTGTTCTCCGACATCGGCGATCTCGAGCATGCGCTGCACAGCCGTACGCTCTCCATGCACGCCAAGATCAAGATGCGGCTGGAGGCCTATGACGACAAGGGTGTGCTGGCCCAGCGCGTGGTCGAGACCACGCCAGGCCGCATTCTGCTCGCGCAGATCCTGCCCAAGCACGAGAACCTGCCGTTCTCGCTGATCAACCGTCTGCTGACCAAGAAGGACCTGCAGAACGTCATCGACTCCGTCTACCGCCACTGCGGCCAGAAGGAGACGGTGATCTTCGCCGATCGCCTGATGGGCCTCGGCTTCTATCACGCCTGCCGCGCCGGCATCTCGTTCGGCAAGGACGATCTCGTCATTCCGGCGGCCAAGGAAAAGCTGGTCGCTCAGACCCAGAAGGAGGTCAAGGAATACGAACAGCAGTACCAAGACGGCCTGATCACCTCCGGTGAGAAGTACAACAAGGTCGTCGACGCCTGGTCGCGCTGCTCGGATCGCGTGGCCGAGGAGATGATGAAGGGCATTTCAACGCCGCGGCCGGGCCGTCCGGTCAACGCGGTGTGGATGATGGCCCATTCCGGCGCGCGTGGTTCGGCGACGCAGATGAAGCAGCTCGCCGGCATGCGCGGTCTCATGACCAAGCCGTCGGGCGAGATCATCGAGACGCCAATCATCTCGAACTTCAAGGAAGGCCTGTCGGTGCTGGAGTACTTCAACTCCACCCACGGCGCGCGTAAGGGCTTGGCCGACACGGCGCTCAAGACGGCGAACTCGGGTTACCTGACCCGCCGTCTGGTCGACGTGGCTCAGGACTGCATCATCGTCGAGGAAGATTGCGGCACCGAGCGTGGCCTCACCATGCGCGCCGTCGTCGATGGCGGTGACGTGATCGAGCCGCTCTCGGAGCGGGTGCTGGGCCGTACGGCGCTGGACGACATCGTCGATCCGGTGAACGGCACGCTGATCAGCAAGGCCGGCGAACTGATCGACGAGGTCAAGGTCGAGCAGATCGAGAAGGCGGGCATCGAGGAGATCCGCATCCGCTCGGTGCTGACCTGCGATACCAAGATCGGCGTCTGCGGCAAATGCTACGGCCGCGATCTGGCCCGCGGTACCCCGGTCAATATCGGCGAAGCGGTGGGCGTCATCGCCGCCCAGTCGATCGGCGAGCCGGGCACGCAGCTCACCATGCGTACCTTCCACATCGGCGGCGCCGCGCAGCGTGGTGCGGAGCAGTCGAACATCGAGGCGAGCCATGACGGCACCATCCAGGTGCGCAACCGCAACGTCGTGATCAACAGCCAGGGCGTTCCGGTCGTGATGGGCCGCAACACCGAGCTGGTGCTGATCGATGGCGCCCAGCGCGAGCGTGCCAAGCATCGCGTGCCCTACGGCGCGCGTCTGCTGGTCGACAGCGACACGCCCGTCTCGAAGGGGCAGAAGCTCGCCGAGTGGGATCCGTACACCCTGCCGATCATCACCGAAAAGGCCGGCAAGGCGGTCTACGTCGACCTCGTCGAAGGCGTGTCGATGCGCGAAGTGATCGACGACTCGACGGGTATCTCCAATCGCGTCGTCGTCGACTGGAAAGGCCAGCCGCGCGGTGGCGATCTGCGTCCGCGCATCGCCATCCACGATGCCGACGGCAACCCGATCATGCTGGCCAACGGCCAGGAGGCTCGGTACCTGCTGTCGCTCGACTCGGTGCTCTCGGTCGAGAACGGCCAGGACGTCCATGCCGGCGACATCCTCGCGCGTATCCCGCGTGAGGGCGGCAAGAACCGCGACATCACGGGTGGTCTGCCGCGCGTGGCGGAGCTGTTCGAAGCCCGCAAGCCGAAGGATTTCGCGATCATCTGCGACATCGCCGGCCGCATCGAGTTCGGCAAGGACTACAAGAGCAAGCGCCGCATCCTGATCGTGCCGGAAGGCGAAAATGCGGAGCCGGTCGAGTATCTGATCCCGAAGGGCAAGCGCATCGCGGTCCAGGAAGGCGACTACGTGGAACGCGGCGATCTCCTGATCGACGGCAACCCGGTGCCGCACGACATCCTGCGCGTGCTGGGCATCGAGAAGCTGGCCGAATATCTCGTGAACGAGATCCAGGAGGTCTATCGACTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGACGATCGCGCGTCAGATGCTGCAGAAGGTCGAGATCACCGACGCCGGCGACTCGACGTTCCTGATCGGCGAGCAAGTCGACAAGCAGGAGTTCGATTCGGAGAACGCCAAGCTGCTGGTCGAGAAGATGAAGCCTGCCAAGGCGGACCCGGTGCTGCTCGGCATCACCAAGGCCAGCCTGCAGACCAAGTCGTTCATCTCGGCGGCCTCCTTCCAGGAGACCACCCGCGTGCTCACCGAAGCGGCCGTTTCGGGCAAGGTCGACAGCCTCCAGGGCCTGAAGGAGAACGTCATCGTCGGCCGCCTGATCCCGGCGGGTACCGGCGGAGTCGTGAATCGCCTGAAGGCGATCGCCGCGCAGCGCGACCGCGCCATCCTGGCGGCCGGCGCCGACGGCGAGGACCAGCCGGTCCCGACGCTGGAGGAAGAGCGCGCAGCCGACTGA
PROTEIN sequence
Length: 1391
MTDLINVLGQPQGTPTFDEIRISIASPERIRTWSHGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKFRGITCEKCGVEVTLTKVRRERMGHIELASPVAHIWFLKSLPSRIGLLLDMTLRDLEKILYFENYVVTNPGLTALKYRELLNEDQYLNALDEYGDGSFEAEIGAEAIRAMLQAIDLNEERPRLREELRETTSEAKRKKLVKRLKLCENFIESGARPEWMILELVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRMLQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFIYSRLQNYGMANTIKAAKRMVEKERPEVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPASGKPIIVPSQDIVLGIYYITLEREGEPGEGSLFSDIGDLEHALHSRTLSMHAKIKMRLEAYDDKGVLAQRVVETTPGRILLAQILPKHENLPFSLINRLLTKKDLQNVIDSVYRHCGQKETVIFADRLMGLGFYHACRAGISFGKDDLVIPAAKEKLVAQTQKEVKEYEQQYQDGLITSGEKYNKVVDAWSRCSDRVAEEMMKGISTPRPGRPVNAVWMMAHSGARGSATQMKQLAGMRGLMTKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDCIIVEEDCGTERGLTMRAVVDGGDVIEPLSERVLGRTALDDIVDPVNGTLISKAGELIDEVKVEQIEKAGIEEIRIRSVLTCDTKIGVCGKCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSNIEASHDGTIQVRNRNVVINSQGVPVVMGRNTELVLIDGAQRERAKHRVPYGARLLVDSDTPVSKGQKLAEWDPYTLPIITEKAGKAVYVDLVEGVSMREVIDDSTGISNRVVVDWKGQPRGGDLRPRIAIHDADGNPIMLANGQEARYLLSLDSVLSVENGQDVHAGDILARIPREGGKNRDITGGLPRVAELFEARKPKDFAIICDIAGRIEFGKDYKSKRRILIVPEGENAEPVEYLIPKGKRIAVQEGDYVERGDLLIDGNPVPHDILRVLGIEKLAEYLVNEIQEVYRLQGVKINDKHIETIARQMLQKVEITDAGDSTFLIGEQVDKQEFDSENAKLLVEKMKPAKADPVLLGITKASLQTKSFISAASFQETTRVLTEAAVSGKVDSLQGLKENVIVGRLIPAGTGGVVNRLKAIAAQRDRAILAAGADGEDQPVPTLEEERAAD*