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cn_combo_scaffold_8778_1

Organism: CN-SCN_Rhodospirillales_16x

near complete RP 42 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: comp(1..3321)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; RNA polymerase, beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 999.99
  • Bit_score: 1711
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 999.99
  • Bit_score: 1711
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6A94D similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 999.99
  • Bit_score: 1731
  • Evalue 0.0

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3321
ATGGCCACGGCCTTCAATACGCGGAAAAGGATTCGTCGTTTCTTCGGCCACATCGAATCGGTGGCGCCGATGCCGAACCTCATCGAGGTCCAGAAGAGCTCGTATGAGAGCTTCCTGCAGCGTGTCACGCCGGCAGCCAAGCGCACCCAGTCGGGCCTCCAGGAAGTCTTCCGGGGCGTGTTCCCGATCAAGGACTTCGCCGAGCGCGCCAGCCTGGAGTTCGTGAAGTACGAGTTCGAGGAGCCCAAGTACGACGTCGAAGAGTGCCAGCAGCGCGGCATCACCTACGCCGCGCCGCTTAAGGTCACGCTGCAGCTCGTCGTGTGGGACATCGACGAGGAAGCCGGCTCGCGTTCGATCCGCGATATCAAGGAGCAGGACGTCTACATGGGCGACATGCCGCTCATGACCGACAACGGCACCTTCATCGTGAACGGCACCGAGCGCGTGATTGTGAGCCAGATGCACCGTTCGCCGGGCGTCTTCTTCGATCATGACAAGGGCAAGACCCACAGCTCGGGCAAGTACCTGTTCGCCGCCCGCATCATCCCCTATCGCGGTTCCTGGCTCGACTTCGAGTTCGACGCGAAGGACCTGATCCACGTGCGCATCGATCGTCGCCGCAAGATCCCGGTGACGACGCTCCTGCTGGCGCTCGACAACGACGCCACCTGGAAGAAGCGCGCCTCGGCGGCCGCCAAGAACCAGCCGCTCGATCCGGCGGACGCCCAGGGCCTGTCGCCCGAGGAGATCCTCGCCGCGTTCTACGGTCAGGTCGTCTACAAGCGCGAGAAGGACGGCTGGAACACGCCGTTCGACGGCGAGTCGATGCGCGGCGTGAAGCTGACGCACGATCTTATCAACGGCAAGACCGGCAAGTCGGTCGCCGATGCCGGCACCAAGATGACGCCGCGCCTGCTGGCCAAGCTCAAGGAAGCCGGCCTCAAGGAAATGCGTGTCTCGCCGGAGGAGCTGATCGGCCGCTACGCCGCCCTCGACGTCATCAACGAGAAGACGGGCGAAATCTACGTCGAAGCCGGCCAGGAAATCACCGAGGCTGTCCTCGAGTTGTTCGACGAGAACGAGATCGACGTCCTGCCGACGCTCGCCATCGATCACGTCAACGTCGGCCCCTACATCCGCAACACGCTGGCGGCCGACAAGAACTCGAATCGTGAAGAAGCACTCCTCGACGTCTACCGCGTCATGCGTCCGGGCGAGCCGCCGACGCTGGAGCAGGCCGAGACCCTGTTCCAGGGCCTGCTGTTCGACATTGAGCGCTACGACCTCTCGCCGGTCGGCCGCGTGAAGATGAACATGCGTCTGGGCTTCGAGGGCGTACCCGACAGCCAGCGCACGCTGCGCCGCGAGGACATCCTCGCCGTCGTGAAGGTCCTGCACGACCTCAAGGATGGCCGCGGCGAAATCGACGACATCGATCACCTCGGCAACCGTCGCGTCCGCTCGGTCGGCGAGCTGATGGAGAACCAGTATCGCGTCGGCTTGCTGCGCATGGAGCGGGCGATCCGCGAGCGCATGAGCTCGATCGACATCGACACCGTGATGCCGCACGACCTGATCAACGCCAAGCCGGCGGCGGCGGCGGTGCGCGAGTTCTTCGGTTCGAGCCAGCTCAGCCAGTTCATGGACCAGACCAACCCGCTCTCCGAAGTGACGCACAAGCGTCGCCTCTCGGCGCTTGGACCGGGTGGTCTGACGCGCGAGCGCGCCGGCTTCGAGGTGCGCGACGTGCATCCGACGCATTACGGCCGCATCTGCCCGATCGAAACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTGGCGACCTACGCCCGCGTCAACCAGTACGGCTTCATCGAGAGCCCGTACCGCAAGGTGACGGCCGGCCGCGTCAGCGACGAGGTCGTCTATCTTTCGGCGATGGAGGAGGGCCGCTACACGGTCGCCCAGGCCAACGCTGAGATCGACGCCAAGGGCAAGTTCGTGTCCGAACTGGTGCAGTGCCGCAAGGGCGGCGAGTACATTCTCGGCCGGCCCGAGACGATCGACTTCGTCGACGTCTCGCCCAAGCAGATCGTCTCCGTCGCCGCGGCGCTGATCCCGTTCCTCGAGAACGACGACGCCAACCGCGCGCTGATGGGCTCGAACATGCAGCGCCAGGCGGTGCCGCTCATCCAGGCGGAATCGCCGCTGGTCGGCACCGGCATGGAAGAGGTCGTCGCCCGCGACTCGGGCGTCGCCATCGCGGCGCGCCGCACCGGCATCGTCGACCAGGTCGACGCCATGCGTATCGTCGTGCGTGCGACTGAAGACGTCGGCCCGAACCGGCCGGCGGTCGATATCTACAACCTGCTGAAGTTCCAGCGTTCCAACCAGAGCACCTGCATCACCCAGAAGCCGCTCGTCCGGGTCGGTGACCATGTGAAGCGGGGCGACATCGTGGCCGACGGTCCGTCGACCCGCGATGGCGAGCTCGCGCTCGGCCGCAACGTGCTCGTCGCGTTCATGCCGTGGAATGGCTACAACTTCGAAGACTCGATCCTGCTCTCCGAGCGCATCGTGCGCGATGACGTCTTCACCTCGATCCATATCGAGGAGTTCGAGGTCATGGCCCGCGACACCAAGCTCGGCCAGGAAGAGATCAGCCGCGACATCCCCAACGTCGGCGAGGAAGCGCTCAAGAACCTCGACGAGGCGGGCATCGTCTACATTGGCGCCGAGGTGAAGGCAGGCGACATCCTCGTCGGCAAGGTCACGCCGAAGGGCGAGAGCCCGATGACGCCGGAAGAGAAGCTGCTGCGCGCTATCTTCGGCGAGAAGGCGGCCGACGTGCGCGACACCTCGCTGAAGGTGCCGCCGGGCGTCGAGGGCACCGTGGTCGAGGTTCGCGTCTTCAACCGCCGCGGCGTCGACAAGGACGAGCGCGCGCTCGCCATCGAGCGCGACGAGATCGAGCGTCTCGCCAAGGACCGCGACGACGAAAAGGCCATCCTGGAGCGCAGCTTCTACAGCCAGATCCAGGAGATGCTGCTCAACCAGGTCGTGGCCGGCGGTCTGAAGGGCCTGAAGCCGGGTACGCGCATCACCGACGAGGTTCTGGGCGAGTACACTCCCGGCCAGTGGCGGCAGATTGCGGTCAAGACCGACAAGAAGCAGTCCGAGATCGAGGCGCTGAACAAGCAGTTCGACGAGTCGATGAAGCGTCTGCAGGACCGTTTCGACAGCAAGGTCGACAAGCTGCAGCGCGGCGACGAGCTGCCGCCGGGCGTGATGAAGATGGTCAAGGTCTTCGTCGCGACCAAGCGCAAGCTGCAG
PROTEIN sequence
Length: 1107
MATAFNTRKRIRRFFGHIESVAPMPNLIEVQKSSYESFLQRVTPAAKRTQSGLQEVFRGVFPIKDFAERASLEFVKYEFEEPKYDVEECQQRGITYAAPLKVTLQLVVWDIDEEAGSRSIRDIKEQDVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKYLFAARIIPYRGSWLDFEFDAKDLIHVRIDRRRKIPVTTLLLALDNDATWKKRASAAAKNQPLDPADAQGLSPEEILAAFYGQVVYKREKDGWNTPFDGESMRGVKLTHDLINGKTGKSVADAGTKMTPRLLAKLKEAGLKEMRVSPEELIGRYAALDVINEKTGEIYVEAGQEITEAVLELFDENEIDVLPTLAIDHVNVGPYIRNTLAADKNSNREEALLDVYRVMRPGEPPTLEQAETLFQGLLFDIERYDLSPVGRVKMNMRLGFEGVPDSQRTLRREDILAVVKVLHDLKDGRGEIDDIDHLGNRRVRSVGELMENQYRVGLLRMERAIRERMSSIDIDTVMPHDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATYARVNQYGFIESPYRKVTAGRVSDEVVYLSAMEEGRYTVAQANAEIDAKGKFVSELVQCRKGGEYILGRPETIDFVDVSPKQIVSVAAALIPFLENDDANRALMGSNMQRQAVPLIQAESPLVGTGMEEVVARDSGVAIAARRTGIVDQVDAMRIVVRATEDVGPNRPAVDIYNLLKFQRSNQSTCITQKPLVRVGDHVKRGDIVADGPSTRDGELALGRNVLVAFMPWNGYNFEDSILLSERIVRDDVFTSIHIEEFEVMARDTKLGQEEISRDIPNVGEEALKNLDEAGIVYIGAEVKAGDILVGKVTPKGESPMTPEEKLLRAIFGEKAADVRDTSLKVPPGVEGTVVEVRVFNRRGVDKDERALAIERDEIERLAKDRDDEKAILERSFYSQIQEMLLNQVVAGGLKGLKPGTRITDEVLGEYTPGQWRQIAVKTDKKQSEIEALNKQFDESMKRLQDRFDSKVDKLQRGDELPPGVMKMVKVFVATKRKLQ