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cn_combo_scaffold_8778_4

Organism: CN-SCN_Rhodospirillales_16x

near complete RP 42 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: comp(4809..5501)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=RL1_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 228.0
  • Bit_score: 363
  • Evalue 1.30e-97
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 228.0
  • Bit_score: 363
  • Evalue 3.70e-98
  • rbh
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospi similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 228.0
  • Bit_score: 363
  • Evalue 1.80e-97

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Taxonomy

Rhodospirillum centenum → Rhodospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGACCCAGGGCAAGCGTTACAAGGCGGCGGTCACCACGGTCGACCGCGAGAAGATGTACCCCCTCGATGAGGCGGTGAAGATCGTCAAGGCGAACGCCAAGGCGAAGTTCGACGAGACCATCGAGGTCGCGATGAATCTCGGCATCGACCCGCGCCACGCCGACCAGGCGGTGCGCGGCATGATCGAGCTGCCGAACGGCACCGGCAAGTCGGTGCGCGTCGCGGTGTTCGCGCGGGGCGCCAAGGCCGACGAGGCCAAGGCAGCCGGTGCCGATCTGGTCGGTGCGGAAGACCTCGCCGAGAAGATCAATGCCGGCGAGATGAATTTCGAGCGCTGCGTCGCCACGCCGGACATGATGGGCGTGGTCGGCCGTCTCGGTAAGGTGCTGGGCCCGCGCGGCCTGATGCCGAACCCGAAGCTCGGCACCGTGACGCAGGATGTCGCCGCGGCCGTGAAGGCTGCCAAGGCCGGCTCGATCGAGTTCCGCGCCGAGAAGGCCGGCATCGTGCACGCCGGCGTCGGCAAGGCCTCGTTCAGCGAGGAGGCGATCGTCGCCAACGTGAAGGCGCTGGTGAACGCGATTAACCGCGCCAAGCCGAGCGGCGCCAAGGGCACCTTCATCAAGAAGGTGTCGCTGAGTTCGACGATGGGTCCGGGCATCAAGCTCGACCCGGCTTCCGCGCTGAGCTAG
PROTEIN sequence
Length: 231
MTQGKRYKAAVTTVDREKMYPLDEAVKIVKANAKAKFDETIEVAMNLGIDPRHADQAVRGMIELPNGTGKSVRVAVFARGAKADEAKAAGADLVGAEDLAEKINAGEMNFERCVATPDMMGVVGRLGKVLGPRGLMPNPKLGTVTQDVAAAVKAAKAGSIEFRAEKAGIVHAGVGKASFSEEAIVANVKALVNAINRAKPSGAKGTFIKKVSLSSTMGPGIKLDPASALS*