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cn_combo_scaffold_12234_2

Organism: CN-SCN_Rhodospirillales_16x

near complete RP 42 / 55 BSCG 41 / 51 ASCG 9 / 38
Location: comp(1092..2198)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE6CCB related cluster n=1 Tax=unknown RepID=UPI0003CE6CCB similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 364.0
  • Bit_score: 289
  • Evalue 6.60e-75
Multidrug resistance protein {ECO:0000313|EMBL:KIE05343.1}; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 334.0
  • Bit_score: 293
  • Evalue 3.80e-76
secretion protein HlyD family protein similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 334.0
  • Bit_score: 290
  • Evalue 6.40e-76

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Taxonomy

endosymbiont of Acanthamoeba sp. UWC36 → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGAGCGACGACCCGCCCCCGACGATAGCGATCCGTCCTCGCAGATTTTCGCGAAGCCGGACCCGGGTCCTTCTCCTCGCGCTGGTACCTTTGGTCGGCTTAGGAGGCGGCGGATACTGGTACATCTACGGCGCGCGCTACGTTTCGACCGACAATGCCTATGTAAGAGCGGCGAAGACGACCATCTCGGCCGAGGTTTCGGGACGAATCGCCTCTGTGCTCGTGGGCGAGAATGAAGCCGTCCGCGCGGGGCAGCCGCTTCTGGCAATAGACGATGAACTATACCGGATTGCATTGTCGCGAGCTGAGGCCGAGCGCGCGTCCGTGATCGCTCGACTCGATTCCCTGCGCGCCCAAATCCGGCAAAAACGCGAGGAACTGGAACTGGCGACTATCATGGCGAGCTACGCTGAGCGCGAACACGATCGTGGCGCGACGCTTGCCGCAAGAAGCGTCGTTAGCGCAGCCAAGCTCGACGAAGCCAAGAACCGGATGGACGGCGCCCGTCAACAGACGGCGATCGTTCGACAGGAGATCGGGCGCCTGGTTGTAGAACTTGGCGGCGACGAGCAAGCTCCCGCCGATGAGCATCCAGCCGTCAAGCAAGCTCAGGCGATGATAGACGAGGCACGGGTTGCGCTGGAGCGCACGAAGATATTCTCGCCGGTCGACGGCATCGTGTCGCGAGTCGATTCAATTCGGCCTGGGGACCATATCCGCCCCGGAATTTCGCTGTTCTCGGTCATCTCGATGAGCGAGAAGTGGATTGAAGCGAACTTTAAGGAAACAGATCTCACCCGCGTCGTGGCCGGGCAGCGCGTAGAAGCGACCGTCGACACCTTCCCCGGCATCAAGCTGTCAGCCGAGGTTCATAGCATTGGGGCTGCGACGGGAGCGGAATTCGCCCTCATTCCACCACAGAATGCCAGCGGCAACTGGGTCAAGATCGTTCAGCGGATTCCCGTTCGTATCCGACTTCTGGAAGCACGCTCGCTTCCGTCGTTGCGGGCAGGCATGAGCGCGCAAGTAACGATCGACACCGGGTATAATCGTCCTTTGCCTAATCTGGTTGCCCGAGCAATAGGGCGTGCGGATGGCGGTGAGTGA
PROTEIN sequence
Length: 369
MSDDPPPTIAIRPRRFSRSRTRVLLLALVPLVGLGGGGYWYIYGARYVSTDNAYVRAAKTTISAEVSGRIASVLVGENEAVRAGQPLLAIDDELYRIALSRAEAERASVIARLDSLRAQIRQKREELELATIMASYAEREHDRGATLAARSVVSAAKLDEAKNRMDGARQQTAIVRQEIGRLVVELGGDEQAPADEHPAVKQAQAMIDEARVALERTKIFSPVDGIVSRVDSIRPGDHIRPGISLFSVISMSEKWIEANFKETDLTRVVAGQRVEATVDTFPGIKLSAEVHSIGAATGAEFALIPPQNASGNWVKIVQRIPVRIRLLEARSLPSLRAGMSAQVTIDTGYNRPLPNLVARAIGRADGGE*