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cn_combo_scaffold_11882_8

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(3243..3866)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Sphingobium xenophagum RepID=UPI00031672E0 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 207.0
  • Bit_score: 398
  • Evalue 4.30e-108
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 207.0
  • Bit_score: 390
  • Evalue 1.70e-105
rplD; ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 207.0
  • Bit_score: 359
  • Evalue 8.20e-97

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGAAGGTCAAGGTACAGACCCTCGACGCAGCAGAAGCTGGCGATCTGGAGCTGAACGATGCCGTTTTCGGCCTCGAGCCCCGCGCCGACATTCTGCATCGCGTCGTCACCTGGCAGCTTGAAAAGCGCCGCGGCACCGCCCGTGCCACGCGCGAGCGCAGCGATGTCGCCCGCACCGGCAAGAAGTTCGGTCGCCAGAAGGGCGGCGGCACCGCTCGTCACGGCGATCGCCGTGCGCCGGTGTTCATCGGCGGTGGTAAGGCCCACGGTGCCCGCGTCCGTGACTTCAATCCCTCGCTGAACAAGAAGGTTCGCGCGCTGGGTCTGAAGATGGCGCTGTCGTCGAAGGTCAAGGCTGGTACGCTCACGATCATCGACAGCCTAGATGTTGCCGAAGGCAAGACCAAAGCGCTGGTCGCCAGCCTCGCCAAGCTGAACCTCAACAAGGTGCTGTTCATCGACGGCGACGCTGTGAACATCAGCTTTGCCAAGGCATCGGCCAACATTGTCGGCGTGGACCTGCTGCCGGCCGTCGGCGCCAATGTCTACGACATTTTGAAAGCCGACTCGCTGGTGCTCACGCGCGCTGCGGTCGAAAAGCTGGAGGCCCGTTTCAATGGCTAA
PROTEIN sequence
Length: 208
MKVKVQTLDAAEAGDLELNDAVFGLEPRADILHRVVTWQLEKRRGTARATRERSDVARTGKKFGRQKGGGTARHGDRRAPVFIGGGKAHGARVRDFNPSLNKKVRALGLKMALSSKVKAGTLTIIDSLDVAEGKTKALVASLAKLNLNKVLFIDGDAVNISFAKASANIVGVDLLPAVGANVYDILKADSLVLTRAAVEKLEARFNG*