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cn_combo_scaffold_6465_2

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(2571..4577)

Top 3 Functional Annotations

Value Algorithm Source
TraD n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH25_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 668.0
  • Bit_score: 1214
  • Evalue 0.0
Conjugal transfer protein TraD {ECO:0000313|EMBL:AJR25330.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobi similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 668.0
  • Bit_score: 1215
  • Evalue 0.0
TraD similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 684.0
  • Bit_score: 1000
  • Evalue 3.00e-289

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Taxonomy

Sphingobium sp. YBL2 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2007
GTGAGCATCTTCCGTAACGACACACTGGGCTCTTGGACCAGGGGCGGTCAGGCCATCGTTCACAATGTTCGCATGACCACGCAGGTCTTCTTCCAGACCCTGCTGGCGGGGATCGCCATCTGGGTCGGCGGTACCCTCTGGTATGTACTGGGGAAGTCGACCGACTATCAGCGCTTTGTTGCCGTCAAGATCGCTGAGGCGACGCTCAAAAGCGATGTGCCCGGCGGCGCGCCGCTGCTCTTTCGGACCCCGTCGGGTCGCCAATATTGGACGACGTCCGATGCCTTGCTGGGCTCCCCCATCGCCAGGAAGACCATGCAGGCTATGGAGCATCATCTGGTGTTCGGCGCGGCACTTGCGGGCGCCTTTGCCCTCCTGATGCTGGTTTGGGCATGGTTCTATTTCACCCGTACGGGGAAGGGCCTTGGTTCCAATCAGTTCCTGCGCGGCGCGCGCTTTGGCGCTGCGCGTCAGCTGCGGCGGCAATTGTGGCGCAGCCGGAAGGGCAGCTTTGCTATCGGCGGCGTGCCCGTTCCCGATGCGTTCGAGCCTGAACATATCCTCATCTGTGGTGCGCCCGGCACGGGCAAGACCAACATCATCGTGAAGATGCTGGACGGCATGCGAAAGCAAGGCAAGCGGGCAATCGTCTATGATACCGCCGGCACCTTCGTTGAGAAATTCTACCGGCCTGGGCACGACATTCTGCTCAATCCGCTGGATAACCGCTCCGACTTCTGGTCGCCCTGGGTCGATGTTCCGCGTGACTATCATTATGATCAGATCGCGGAATCGACGATCCCAGACAAAGGTGGCGATCCCTTCTGGGCGAAGGCGGCCCGCGGCACGCTGGTGGCGGTCCTGCGCAAGCTTGCCAGATATGACGGGACGCTGGTTTCCGTGCTCCTGGAAACGGTGGTGCGCAGCCCTCTGAAGACGCTGGCAAGTTTTGCGGAGGGCACCGATGCTGCGGCTTTCATCTCGATGGAAGGCGACCGCACTTCTGCGGGCATCCGCGCGGAACTGGCCTCGGTGATGCGCAGCTTCTCCTATCTCGATGACACGGCCGACGGCTTCTCCATCCGGGACTGGGTCGCCAATGAGCAGGATGACAGCTGGCTCTTCATCACCGTCAAGGCGGATCAGCTCCCTTCCCTCCGGCCCCTCGTCACCGTCTGGCTCGACATCGCGATAAGCGCCATCATGAGCCTCCCGCCCGACCGTAAGCGCCGCCTCTATTGTGTCATCGACGAGCTTCCCACACTTCAGAAACTGCCATCGCTAAGCGACTTTCTCGCCCGCGCGCGAAAATATGGCGGCTGCGGCATATTGGGGTTTCAGTCCTACCCGCAGCTTGAGGCGACCTACGGCATCCAGGATGCCGCGGCGATCACCGGCTATTGCTCGACCTGGGTGGCGCTGCGCGCCAACGACACTCCCACCGCCAAGCATGTTTCGGAAAATCTAGGGCAGGTCGAGCAGGTCGAGGCCAATGAGGGCATGTCCTACGGCGTCAACGACATGCGGGATGGGGTCAACCTGTCGCGGATGCAGGTGACCCGCCCGTTGGTCATGCATACCGAGGTCACCAATCTTCCCAATCTCGCGGGTTTCCTTCGGTTCGGACGGAACCTTCCCGTGGTGCGGTTCACCGATAATTATAATGCGCTTCCCAGCCTGCAGGCCGCATTCGTCGAGCGGCTAGTTCCGCTCCTTCGTCTCGACCCGGATGAGGGCGACAAGTCTCCTCCGAAATCTTCAGGATCGCGATCCAAGCGTCGGCGCGCGAGGAAATCGGAAGCTCCCGAGCTCCCCCTCGGAGCGGACAAGGGCAGCACGCCCGCGCATGACGAGATCAGCGTGCAAGGCTACTCATCTAATCCTGCGGAGGGTGAAAATGAAAACGGAGAAAGAGCGCTGCCGAGGCTCCTTGGAAGGGCGAGCGGCTTCCGCCTTCGGCAACACGGGCGCGTATCGGGCGACCGTAGTGAGGCGAGGCCGGCATGA
PROTEIN sequence
Length: 669
VSIFRNDTLGSWTRGGQAIVHNVRMTTQVFFQTLLAGIAIWVGGTLWYVLGKSTDYQRFVAVKIAEATLKSDVPGGAPLLFRTPSGRQYWTTSDALLGSPIARKTMQAMEHHLVFGAALAGAFALLMLVWAWFYFTRTGKGLGSNQFLRGARFGAARQLRRQLWRSRKGSFAIGGVPVPDAFEPEHILICGAPGTGKTNIIVKMLDGMRKQGKRAIVYDTAGTFVEKFYRPGHDILLNPLDNRSDFWSPWVDVPRDYHYDQIAESTIPDKGGDPFWAKAARGTLVAVLRKLARYDGTLVSVLLETVVRSPLKTLASFAEGTDAAAFISMEGDRTSAGIRAELASVMRSFSYLDDTADGFSIRDWVANEQDDSWLFITVKADQLPSLRPLVTVWLDIAISAIMSLPPDRKRRLYCVIDELPTLQKLPSLSDFLARARKYGGCGILGFQSYPQLEATYGIQDAAAITGYCSTWVALRANDTPTAKHVSENLGQVEQVEANEGMSYGVNDMRDGVNLSRMQVTRPLVMHTEVTNLPNLAGFLRFGRNLPVVRFTDNYNALPSLQAAFVERLVPLLRLDPDEGDKSPPKSSGSRSKRRRARKSEAPELPLGADKGSTPAHDEISVQGYSSNPAEGENENGERALPRLLGRASGFRLRQHGRVSGDRSEARPA*