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cn_combo_scaffold_9038_5

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(4106..5554)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraH n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B34751 similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 482.0
  • Bit_score: 454
  • Evalue 1.60e-124
Conjugative relaxosome accessory transposon family protein {ECO:0000313|EMBL:KGB51908.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sph similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 482.0
  • Bit_score: 921
  • Evalue 6.30e-265
TraH family protein similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 482.0
  • Bit_score: 916
  • Evalue 2.40e-264

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Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1449
ATGGCTGATATCAAATTCATCGCGCGGATCCGCGTAGCAGTTTCTCGCATCGGTATCGGCGTCATCGCCCTTTCGGTCGCGGCGGCACCGGCACAGGCCGGCGTCGGTGATGAGATGAGCGATTTCTTCAACGATATGGGGGCGTCCGCCAATGCGACGGGCGCGACAGCCTATCAGGGGCAGTCAGCAGGCTATTACTCGCTGGGTTCGGTGTGGGCCCGATTCCCGCAAAAGAGCGTCTATCCTGCCAACATCCAGCTTCCGAAGGTGCGCGCCGGCTGCGGCGGCATCGATATCTTCTCCGGCTCCTTCTCCTTTATCAACATGTCGGAGTTCGTGGCGAACCTGAAGGCCATCGCGAACAATGCCGTCGGCTTCGCCTTCAAGTTGGCGATCGACAGCATCAGTCCGCAAATCGGCGGCGTCATCGACCAGATGCAGGACATCGCCAACAAGGTGAACCAGTTCAACATGCAGAGTTGCGAAGCGGCCGCAGCCGCCGTTGGTGCGGTGTGGCCGAAGGTCGATGCGGCAGAGGATCGAATCTGCCAGTCGATCGGCACGTCTGCGGGTCGGTTCTCCGACTGGGCGAAGTCGCGGCGCGGTTGTGGCAACGGCGGCGAGCGATCGTCGACGATCAACTCGAACACCGATCCCGCCCTCGCGGCGATGACCCCCGGCCCCAAAAACTATGCCTGGGATATGATCAAGCAATCACCGCTCGAAAGTTCGGATCGGCAGATGCGCGAGCTGGTCATGACGCTCACGGGCACGATCGTCGTGGGCAAGCGCCCGTCGGACAACGATCCGCTGCCGATCATTTATCGCGGTGAGGGAGATCCGGCGATCCTCGATGCGCTGCTCGACGGTGACAAGGCAATCGACGTCCTCGGTTGCGATGAGACCGATAAGTGCCTCAACCCGGGCAAGCGGACGATCCCCGCGCTTGGCGGCACGGCATTGCGGCCACGCGTCGCCGCACTGATCCAGTCGATGAGCGACAAGGTGCGGAGCAATGCCGCGTTGACCATCGAAGAAAAGAACCTTCTCGGGGTGGCCAGCATTCCCCTTTACAAGGTGGTCGCAGTGCAGGCGGCGTCGGGCTTCAACCTGTCGCCGGGCGAGCTTAACTCCCTCGCGGAAGTCACCGCCATCGATCTGCTCAATTCGATCGTCCAGCGGATGCTTGACCAGGTTGCATCGGGCCAGTCGAACAACAGCAATCAAGCCGATGCCGAGAATCTTCGCCAGTTCAACGAGCAGCTCGCTCGTGTTCGCCAGCGGCTGTTCGAGCGCGAAAGCACGGTCAATCAGCGCATCACGCGCACCTTCGAAATCGTCGATCGTGCGATGATGATCGAAAGCACCCTGCAGACGCGCATGGCGCCAGGCATGGCCGCTTCCCTCAATTTCTCCCGCGCCCTTTCGGCGCAAGGTTTGCGGCCCTGA
PROTEIN sequence
Length: 483
MADIKFIARIRVAVSRIGIGVIALSVAAAPAQAGVGDEMSDFFNDMGASANATGATAYQGQSAGYYSLGSVWARFPQKSVYPANIQLPKVRAGCGGIDIFSGSFSFINMSEFVANLKAIANNAVGFAFKLAIDSISPQIGGVIDQMQDIANKVNQFNMQSCEAAAAAVGAVWPKVDAAEDRICQSIGTSAGRFSDWAKSRRGCGNGGERSSTINSNTDPALAAMTPGPKNYAWDMIKQSPLESSDRQMRELVMTLTGTIVVGKRPSDNDPLPIIYRGEGDPAILDALLDGDKAIDVLGCDETDKCLNPGKRTIPALGGTALRPRVAALIQSMSDKVRSNAALTIEEKNLLGVASIPLYKVVAVQAASGFNLSPGELNSLAEVTAIDLLNSIVQRMLDQVASGQSNNSNQADAENLRQFNEQLARVRQRLFERESTVNQRITRTFEIVDRAMMIESTLQTRMAPGMAASLNFSRALSAQGLRP*