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cn_combo_scaffold_9038_6

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(5554..6414)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraF n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC93E similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 278.0
  • Bit_score: 358
  • Evalue 6.90e-96
TraF-like protein {ECO:0000313|EMBL:KGB51909.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC8 similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 286.0
  • Bit_score: 491
  • Evalue 7.30e-136
TraF-like protein similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 286.0
  • Bit_score: 476
  • Evalue 6.40e-132

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Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
ATGAAGACGGCGATCCATAATGCACTTGCACTGGCCGGAGCTATGTTCGTCGTTGTCGGCGCACCTCTTCGAGCACAACCATCGCCCGACCCGCACGAGTCGACATACTCGGGCGACGAACCCGCTCCCGGTGCAGCGGACAATTCTCCCAACCAGGATTTCTACTGCGGCGCCCGCAAGCTCGGCACCTGGTTCTACTGCGAAAAGCCGAAACCGCGGCCGAACCCCAAGTCGGCGCCGGCGCCATCGACGACGGCCGCCAGCGAGCGTCTGGCCGCGATCAGCAAGCAGCTCGACGACCTGAAGGCGCGTGCGATTCTCGAGCCGTCGGAAGCAAACGTCACCGCATACATCCGGTTTCAGCGCGAGCAGCTCGACCGCGCCTCCATGTTCTCGGACGTCTGGCAGCGGTCGATGTGGCAAAATCCCGAGCTCGATTATACACTTCAGCGCCCCGTATCGACGTTGGCGAAGCGCGCGTGGATCGACAATCGCAAGGCCGAGCAGGAACTGGCGCTCAGGAACCTCTCGAAACGCTACGGTATCTTCTACTTCTATGCCCAGAGCTGTGGTGCCTGCGAGATCTTCGCGCCGATCTTGAAATCACTCGCGACCAGCAGCGGTTTCAACGTCGTCGCCGTTTCCATGGATGGCGGTCCGAACCGCGAATTTCCCAATTACGTCGTCGACGTCGGGCAGCACGCGAAGATGGGCCTGAGCTCTAAGGCAACGCCGGCACTGGTACTCTACGACACCGTTGCGCGCCGTCCGATCCCGATCGGGACCGGTATTTTGTCGGCCGACGAAATTACCGAACGCATTTTCACGCTCACGAGCACCAAAGTGGGGAGCGACTACTGA
PROTEIN sequence
Length: 287
MKTAIHNALALAGAMFVVVGAPLRAQPSPDPHESTYSGDEPAPGAADNSPNQDFYCGARKLGTWFYCEKPKPRPNPKSAPAPSTTAASERLAAISKQLDDLKARAILEPSEANVTAYIRFQREQLDRASMFSDVWQRSMWQNPELDYTLQRPVSTLAKRAWIDNRKAEQELALRNLSKRYGIFYFYAQSCGACEIFAPILKSLATSSGFNVVAVSMDGGPNREFPNYVVDVGQHAKMGLSSKATPALVLYDTVARRPIPIGTGILSADEITERIFTLTSTKVGSDY*