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cn_combo_scaffold_9300_4

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(1956..2543)

Top 3 Functional Annotations

Value Algorithm Source
histidine kinase n=1 Tax=Sphingobium xenophagum RepID=UPI0002EC6849 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 190.0
  • Bit_score: 374
  • Evalue 4.90e-101
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:CCW15792.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 195.0
  • Bit_score: 372
  • Evalue 3.40e-100
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 195.0
  • Bit_score: 276
  • Evalue 5.10e-72

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGTCTCTGTCTGAAATGATCGCCAACAGCGCGATCGCCGCCGTGATCAGCAACCCCCGCCTGCCCGACAATCCGATTGTCGAATGCAATGAAGCCTTCATTGCGCTGACCGGCTATACGCGGGATGAAATTGTCGGGCGCAATTGCCGCTTCCTGTCCGGGCCGGATACCGAACCCTGGCTCAGCGAGACGATCCGCGCTGGCGTGCGCGAACGGCGGCCGGTGCTGGTGGAGATATTGAATTACCGCAAGGACGGCACGCCGTTCCGCAACGCGGTGATGGTCGCGCCCATTTTTGGCGTCGATGGCGAACTGGACTATTTTCTGGGCTCGCAAATGGCGGTGGAAAGCCCGGACGCGACGGGCGCGGAACGATCGTCGGGCGCGCGTGAGCGGATCGCTGCATTGACGTCGCGCCAGCGTGACGTGCTGATCGCGATGGCGGCGGGCAAGCTCAACAAGCAGATCGCCTGGGATCTGGGCCTGACCGAACGCACGGTGAAGATGCACCGCGCCGCGATGCTCAAGGCGCTGGGCGTCAGGACCGGAGCGGAAGGGATCAGGCTGGCGATAGAGGCTGGCTATTAG
PROTEIN sequence
Length: 196
MSLSEMIANSAIAAVISNPRLPDNPIVECNEAFIALTGYTRDEIVGRNCRFLSGPDTEPWLSETIRAGVRERRPVLVEILNYRKDGTPFRNAVMVAPIFGVDGELDYFLGSQMAVESPDATGAERSSGARERIAALTSRQRDVLIAMAAGKLNKQIAWDLGLTERTVKMHRAAMLKALGVRTGAEGIRLAIEAGY*