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cn_combo_scaffold_10125_4

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(3781..4347)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003799588 similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 170.0
  • Bit_score: 200
  • Evalue 2.10e-48
Sphingomonas taxi strain 30a NODE_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26016.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 169.0
  • Bit_score: 204
  • Evalue 1.50e-49
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 158.0
  • Bit_score: 161
  • Evalue 3.00e-37

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
TTGCCTCCGAACGCCCCTGGAGAAAAAGGTAAACGGGAGAAGCTCGTCCACGCCCCGCAATCCGGTCTTGCCGCCGTGTACGAAGCGTACCGTCCGGAGCTTCTGCGCTTTCTGGTCACGCGCACAGGCGATCCGGTCGAAGCGGAAGACGTGCTTCAGGAACTCTGGCTGCGAGTTCATGCGGCCGTCGGCAGCCCCGTGGCAAATGGCCGCGCGTATCTCTACCGCGCAGCACAGAATCTTGTGCTAGACCGGATGCGGGAGAGGCGCCGACGCGCGACGCGCGACCGTGACTGGTCAGACGCGGAGTATGGGGCTGCCGGCCTAAGCGAGGCAGCCGATCCGCGCCTGAGCGCCGACCAGGCAATGGAGGAGCGGGAGCGCTCGGCAAGGCTGGAGATTGCTATCGCGGCGATTCCGCCCGCAGCCGGCCGAGTGTTCCGGCTTCACAAGCTCGATGGGCTACCGCACGCGGACGTTGCCCGAGAGCTCGGTATAACGCGCAGCGGCGTGGAGAAGCACATGGCAACCGCGATGGCTTTTCTTCGCCGGACGCTGAAGGACTGA
PROTEIN sequence
Length: 189
LPPNAPGEKGKREKLVHAPQSGLAAVYEAYRPELLRFLVTRTGDPVEAEDVLQELWLRVHAAVGSPVANGRAYLYRAAQNLVLDRMRERRRRATRDRDWSDAEYGAAGLSEAADPRLSADQAMEERERSARLEIAIAAIPPAAGRVFRLHKLDGLPHADVARELGITRSGVEKHMATAMAFLRRTLKD*