ggKbase home page

cn_combo_scaffold_10548_5

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(4335..5669)

Top 3 Functional Annotations

Value Algorithm Source
translocation protein TolB n=1 Tax=Sphingobium xenophagum RepID=UPI00036E8CDF similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 444.0
  • Bit_score: 893
  • Evalue 9.20e-257
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 444.0
  • Bit_score: 878
  • Evalue 3.30e-252
protein tolB similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 436.0
  • Bit_score: 774
  • Evalue 2.30e-221

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGAAACCCTCCCTTTTGCGCCGCCTGAGCGTGGCGACCGCCGCGTTGCTCGCCCTCACCGCCCTGCCTGCCATGGCCCAGCTCTCGGTCGATGTGACCGGCGAGATTGACAGCAATGTGAAGGTCGCCGTCCCCCCCATGCCAGCCCAGCAGGAGGTCGACACGCCAGCCGGGTCGGCCACCGAACTTGGCCGCAAGATCGCCGAAGTCATCGCCTCGGACCTGAAAGGCTCGGGCCTGTTCGATCCGTCCGGCCCCGCTGGCCTGCCGCAAATCCCCTTTGCCGAAGTCACCTTTCCGCAATTCGACAAATGGGGCGCCTATCAGGCGCTGGTACAGGGGTTCGTCCGCACCAGCGGCGGGGAAGCCGACATCACCGTGGGCTGCTACCTCTATGACGTGGCGCTCAAGCAGGAACTGACCCGTCAGGGCTATGTCGTCGCCCCGCGCGACTGGCGCCGCGCCGCGCATAAATGCGCCGACGCCATCTATGCGCGCCTGTCGGGCGAAAGCCCCTTCTTCGACAGCCGCATCGCCTATATCGCCGAAAGCGGGCCGAAGGGCGCGCGGGTCAAGCGGCTCGCCATCATGGACAGCGACGGCGCGAACCATCGCTTCATCCCCAATGGTCAGTCGATGGCGCTCACCCCGCGCTTCTCGCCCGATTATAAATCCATCCTCTATGTCAGCTATCTGGGCAGCCGGGTGCGCCTCTATATCTACGACATTGGCGCGGGCCAGCAGCGGCTGGTGACCGAAAGCAACAACCCGACCTTCGCCCCGCGCTGGTCGCCGGACGGGCGCAACATCCTCTTTTCGATGGCGATTGCCGGCAATACCGACATTTATCGCGTACCCGCCAGCGGCGGCACCCCCGTCCGCCTGACCACTTCGCCGGGCATCGACGTGGGCGGCAGCTATTCGCCCGACGGCAGCCAGATCGTGTTCGAAAGCGACCGGTCGGGCGGCCAGCAAATCTATGTCATGAACGCCGATGGCTCCAACCAGCGCCGGATCAGCCATGGCGGCGGCCGCTATGCGACGCCCGAATGGTCGCCACGCGGCGACCTTATCGCCTTCACCAAGATGGCTGGCGATTTCAAGATCGCGGTGATGACGCCCAATGGCGACAATGAGCGGATCTTGACCAATGGCTGGCAGGACGAACAGCCGACCTGGTCGCCCAATGGCCGGGTGCTGCAATTCTTCCGCACGTCGCCCGGCAAGCAGGGGACGAGCCAGGTGTGGCAGGTCGACCTGACCGGCGTGAACGAACGCCGCATCCCCACGCCTCTCAGTGGTTCCGACCCTGCCTGGGGACCATTGCTGCCCTGA
PROTEIN sequence
Length: 445
MKPSLLRRLSVATAALLALTALPAMAQLSVDVTGEIDSNVKVAVPPMPAQQEVDTPAGSATELGRKIAEVIASDLKGSGLFDPSGPAGLPQIPFAEVTFPQFDKWGAYQALVQGFVRTSGGEADITVGCYLYDVALKQELTRQGYVVAPRDWRRAAHKCADAIYARLSGESPFFDSRIAYIAESGPKGARVKRLAIMDSDGANHRFIPNGQSMALTPRFSPDYKSILYVSYLGSRVRLYIYDIGAGQQRLVTESNNPTFAPRWSPDGRNILFSMAIAGNTDIYRVPASGGTPVRLTTSPGIDVGGSYSPDGSQIVFESDRSGGQQIYVMNADGSNQRRISHGGGRYATPEWSPRGDLIAFTKMAGDFKIAVMTPNGDNERILTNGWQDEQPTWSPNGRVLQFFRTSPGKQGTSQVWQVDLTGVNERRIPTPLSGSDPAWGPLLP*