ggKbase home page

cn_combo_scaffold_10949_3

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(4050..5297)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00031E249E similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 414.0
  • Bit_score: 282
  • Evalue 5.30e-73
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 392.0
  • Bit_score: 278
  • Evalue 3.70e-72
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABQ69490.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 392.0
  • Bit_score: 278
  • Evalue 1.80e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGACCGCGCATTTCAATCTCCGAGCGGCCGCACCCCATGCGGCGGCGCTTCCCGTCCCCGATGAGTGCTCGCTCGAGCCGCTGGACCGCGAGGCGAGGCTGATCGCTGCGGTTCGCCTGTTCGAGCAGGGTGAAACCGCGCCCGCGCTGCGCGCGGTCGAAGCGCTTCTGGCCGAGCATCCGGATTGGGTGGAGGGGCATCTGGTGATGGCCCAGCTTCTCTCGCAGAGCGGCGAGCCGGAGGCCTTTCGCGAATTTCTGAGCTGGACCGTCCGTCGCGCGCGGGGCGATCTGGCGCTTGTGGTTGCCTGCCTGCGCCAGCTCAGCGATGCCGAGCAGCATGGCGCGATCCTGCAACTCGTGCCGGATGTACGCCGCTGGGCGGGCGATCATCTCTTCTTCACCCTGCTGGAAGCCGTGGCGGCCAGTGAACTGGGCGACCTGACTCGCGCCGAGGGGCTATTCCAGGCGGCGGCCAGGGAAGGCGGCGTGCTTTCGCTGCCGCATGTCCGCCATCTCATCCGCACTGGCGACGCCGTGAAGGCCGCGACGGTGGCGGAAGGCTTCGTGCGCGATCAGCCGCGTCATCAGGGCGGGTGGGGACTGCTGGAGACGGCGTGGCGTCTTGTCGGCGACACCCGCCATGCGTGGCTCGTCGGTCAGCCCGGTTTGGTCGAGACGGTCGACGTTGATCTCTCGACCGAAGCGCTCAATGCGCTGGCCGTGTGTCTGCGCCGCCTGCATGGCGCGCGTTCGCATCCGTTCGACCAGTCGTTGCGCGGCGGCACGCAGACCGCCGGCCGGCTGTTCCATCATGATGATATCGAGATTCAGGGCGCCCGCCGTGCGCTTCGCGCTGCCGTGCGGCGCTATCTCGATGCGTTGCCGCCGCACGATCCGCGACATCGGCTGCTGGGCTGTGATCGCGCCGGTTTCCATGTGTCGGATAGCTGGTCCGTGCGGTTGCTGGATGGTGGCTTCCATGTCAGCCACGTCCATCCGCAGGGTACGCTCAGCTCCGCCTTTTATGTGACGCTGCCGACGCTTGGCGATCAATCCCATCATGCCGGCTGGCTCACCATCGGCGAGCCGCCGGAGACACTGCGCACCGGGCTGCCACCCCTGCGCGTCATCGAGCCGAAAGTCGGCCGCCTTGCCCTGTTCCCCAGCTTCCTGTGGCATGGCACGCGGCCATTCCCGCAGGGCGAGCGGATGACGATCGCGTTCGATACGGTTCTGGACCGTTAG
PROTEIN sequence
Length: 416
MTAHFNLRAAAPHAAALPVPDECSLEPLDREARLIAAVRLFEQGETAPALRAVEALLAEHPDWVEGHLVMAQLLSQSGEPEAFREFLSWTVRRARGDLALVVACLRQLSDAEQHGAILQLVPDVRRWAGDHLFFTLLEAVAASELGDLTRAEGLFQAAAREGGVLSLPHVRHLIRTGDAVKAATVAEGFVRDQPRHQGGWGLLETAWRLVGDTRHAWLVGQPGLVETVDVDLSTEALNALAVCLRRLHGARSHPFDQSLRGGTQTAGRLFHHDDIEIQGARRALRAAVRRYLDALPPHDPRHRLLGCDRAGFHVSDSWSVRLLDGGFHVSHVHPQGTLSSAFYVTLPTLGDQSHHAGWLTIGEPPETLRTGLPPLRVIEPKVGRLALFPSFLWHGTRPFPQGERMTIAFDTVLDR*