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cn_combo_scaffold_11312_1

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 1..2946

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter n=1 Tax=Sphingobium xenophagum RepID=UPI0002EB3B39 similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 981.0
  • Bit_score: 1867
  • Evalue 0.0
RND efflux system, inner membrane transporter CmeB {ECO:0000313|EMBL:CCW15991.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 985.0
  • Bit_score: 1806
  • Evalue 0.0
HAE1-family efflux protein similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 981.0
  • Bit_score: 1612
  • Evalue 0.0

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2946
CAGCTGACCGGCATCGACGGGCTGATGTATTTCTCCTCCTCATCCTCCTCGACCGGGCGTTCGTCGATCACGGTGACGTTCGTGAAGGGCACCAACCCGGACACGGCGCAGGTGCAGGTGCAGAACAAGGTGCAGCAAGCGCTCAGTCGCTTGCCCAACGCCGTGCAGCAGCAGGGATTGACCGTCACCAAGTCGCAGACCGACTTCCTGATGCTGGTCGGCCTTTATGATGAGACCAACCGGGCTTCGCAGTCCGACATTTCCGATTATCTGGTCAATCATTTCCAGGATTCGATCGCGCGGATCGACGGCGTGGGATCGTCCCAGATATTCGGATCGCAATATGCAATGCGGATCTGGCTCGACCCCTACAAGCTGGCCGCCGTCAAGCTGATGCCGTCCGACGTGCAGAGCGCGATCGCCGCGCAGAATGTCGAAGTGTCCGCCGGGCAGATCGGCGCTGATCCCGCCCCTGCCGGGCAACAGCTCAACGCGACTGTCACGGCGCGGGCGCGGCTTCAGACGCCCGAGCAGTTCCGCAACATCATCGTCAAGACGCAGAGCGACGGGTCCATCGTCCATCTGTCCGACGTCGCGCGGGTCGAACTGGGCAATGAAAGCTATACTACTGCCGCCCAACTGAACGGTCATCCAGCGTCGGGCATGGCGTTGCAGCTGGCGCCGGGGGCCGATGCGCTCAAGACTGCGGAACTGGTCAAGGCGCGGGTGGCGACGCTGTCGACCAACCTGCCCGACGGCTACCGGATCGTATTCCCGCGCGACACGACGCCCTTCATCAAATTGTCGGTCGAGGAAGTCGTCAAGACATTGATCGAGGCGGTGCTGCTGGTCGTCGTCGTGATGTTCCTGTTCCTGCAAAGCTGGCGCGCGACGCTGATCCCGACAATTGCGGTTCCTGTCGTGCTGCTCGGCACATTCGGCGTGCTGGCGCTATTTGGTTATTCGATCAACACGCTGACCCTGTTCGGCATGGTGCTGTCGATCGGGTTGCTGGTCGACGATGCGATCGTTGTTGTCGAAAATGTCGAGCGCATCATGGAGGAGGAAGGCCTTTCGGCGCGCGAGGCGACGATCAAGTCGATGGAGGAGATTGGCAGCGCACTGGTCGGCATTGCGCTCGTCCTGTCGGCCGTATTGTTGCCCATGGCCTTTTTCGGCGGATCGACGGGTGTAATCTATCGCCAGTTTTCGATCACGATCGTGTCGTCCATGCTGCTGTCGGTGCTGGTGGCGCTGATTCTGTCCCCGGCCTTGTGCGCCACGATCCTGAAACCCATTGCAGAGGAACGGCGGACACAGGGCTGGTCGGGGAAGTTCAATCGCTGGTTTGATCGACTCACCGATGGCTATGTTCGCCGTACGACGCGCATGCTGGGCAAGCGGACGCTGTTCTGGGGTGGTTATGTGGTCATCCTGGCCATCCTAGTCCTGCTGTTCGTGCGGCTCCCCACCAGTTTTCTGCCGGTCGAGGATCAGGGGCAGGTAATGGTGCAAATGACCCTGCCCGCCGGTGCGAAATCCAGTCGCACCGCTCGCGCGGTGGAACAGATGCAGAATTATTTCCTGAGTGACGAGAAGGACAATATCTCCTTCGCCTTCGTCATGACCGGCTTCAGCTTTGCGGGCCAGGGCGAAAATACCGCGCAGGGCTTCATCAATCTGGCGCCATGGGGCGATCGGCCGGGCGCCATAAACAGCGCCAATGCAATTGTCGGGCGGGCCAACAAGCAGCTTGCCGCCATCCGCGATGCGCGGGTGCTGGCGATGACGCCGCCTGCCATTCGCGGCCTTGGCCAGTCCAACGGCTTCACCTTTGAATTGCTCAATAGCGGCGGGCTGTCGCGCGCGCGCTTTCTGGCGTTGCGCGATCAGTTGCTGGCCGCCGCGCAGAAGGACCCGCAGCTTGCAGGCGTGCGCGCCGCCACGCTGGAGGATACGCCACAGCTGAAGGTCGATATCGATTCCGAAAAACTGGCCGTTCTGGGGCTGACCCAAAGCGATGTCGACAATGTGCTGACATCCGCCTGGGGTAGCCGCTACGTCAATGATTTCGTTGATCGCGGCAGGGTGAAGCGCGTTTATATGCAGGCCGATGCGCCCTATCGCGCGCTGCCGAGCGATCTCGACAAATGGATGGTGCGGTCGAACGTCACCGGCGAGATGGTTCCCTTCTCCGCCTTCGCGACCAGCCATTGGACGATGGGACCGACCACCGTTGCGCGTTTCAACGGGCAGTCCGCCTATGAAATTCAGGGACAGGCTGGCCCCGGCGCCAGTTCGGGCGAAGCGATGGACCGGATCGTCGAATTGCAGAAGCAACTGCCCGCCGGCACCAGCTACGCCTGGAGCGGCCTGTCCTATCAGGAGCAATTGTCGGGCGGGCAAGCGCCGTTGCTTTATGCGCTTTCCGTGCTCATCGTCTTTCTGTGCCTGGCCGCGCTGTATGAAAGCTGGTCGATCCCCTTTGCCGTACTGCTGGTCATTCCCCTGGGTCTGATAGGCGCAGTGGTTGCGGTGCGGGCGCGCGGGCTGGAGAATAATATCTATTTTCAGGTCGGGCTGCTGACCACCATGGGGCTGGCGGCGAAGAATGCGATCCTGATCGTCGAATTTGCCGAACTGGCGCATCGGCAGGGCAAGGACGCCCTATCGTCGGCGCTGGAGGCGGCGCGGCTGCGGTTCCGGCCAATCCTGATGACCAGCCTGGCCTTCATCGCAGGGGTCGTCCCGCTCGCCGTCGCCACCGGCGCGGGCGCGCAGAGCCGCATCGCGATCGGCACGGCAGTGGTGGGCGGCATGGTGACGGCGACGGTGTTGGCGATTTTCTACGTGCCGCTCTTCTTCGTCACCATCGCCCGGCTGTTCGGCAATGACCGGCCGACCAAGCCTGAGCCGGCCCCGCCCGCTGCCGGAGTGCCCGCATGA
PROTEIN sequence
Length: 982
QLTGIDGLMYFSSSSSSTGRSSITVTFVKGTNPDTAQVQVQNKVQQALSRLPNAVQQQGLTVTKSQTDFLMLVGLYDETNRASQSDISDYLVNHFQDSIARIDGVGSSQIFGSQYAMRIWLDPYKLAAVKLMPSDVQSAIAAQNVEVSAGQIGADPAPAGQQLNATVTARARLQTPEQFRNIIVKTQSDGSIVHLSDVARVELGNESYTTAAQLNGHPASGMALQLAPGADALKTAELVKARVATLSTNLPDGYRIVFPRDTTPFIKLSVEEVVKTLIEAVLLVVVVMFLFLQSWRATLIPTIAVPVVLLGTFGVLALFGYSINTLTLFGMVLSIGLLVDDAIVVVENVERIMEEEGLSAREATIKSMEEIGSALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSSMLLSVLVALILSPALCATILKPIAEERRTQGWSGKFNRWFDRLTDGYVRRTTRMLGKRTLFWGGYVVILAILVLLFVRLPTSFLPVEDQGQVMVQMTLPAGAKSSRTARAVEQMQNYFLSDEKDNISFAFVMTGFSFAGQGENTAQGFINLAPWGDRPGAINSANAIVGRANKQLAAIRDARVLAMTPPAIRGLGQSNGFTFELLNSGGLSRARFLALRDQLLAAAQKDPQLAGVRAATLEDTPQLKVDIDSEKLAVLGLTQSDVDNVLTSAWGSRYVNDFVDRGRVKRVYMQADAPYRALPSDLDKWMVRSNVTGEMVPFSAFATSHWTMGPTTVARFNGQSAYEIQGQAGPGASSGEAMDRIVELQKQLPAGTSYAWSGLSYQEQLSGGQAPLLYALSVLIVFLCLAALYESWSIPFAVLLVIPLGLIGAVVAVRARGLENNIYFQVGLLTTMGLAAKNAILIVEFAELAHRQGKDALSSALEAARLRFRPILMTSLAFIAGVVPLAVATGAGAQSRIAIGTAVVGGMVTATVLAIFYVPLFFVTIARLFGNDRPTKPEPAPPAAGVPA*