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cn_combo_scaffold_11312_2

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 2943..4298

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter n=2 Tax=Sphingobium xenophagum RepID=UPI000366408B similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 439.0
  • Bit_score: 805
  • Evalue 3.40e-230
RND efflux system, outer membrane lipoprotein CmeC {ECO:0000313|EMBL:CCW15992.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 451.0
  • Bit_score: 742
  • Evalue 2.90e-211
RND-family efflux transporter similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 454.0
  • Bit_score: 628
  • Evalue 1.20e-177

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1356
ATGAACCGTACCGCCCTTCCTTCGGTCGCTGGGTTGATGCTGGCAGCTTGTACCATGGCTCCGGCCTATGAGCGCCCTGCCCCGCCGATCCCGGCGATGCTCCCGACGGGTGAAGCCTATGCGCCTGCACAGGTTGGCGTGCAACCAAGACTGGCCTGGGGGCAAGTCGTCAGCGATCCGGCGCTGCGCACCGTGATCGAACGGGCGCTGGCCAATAATCGCGACCTGCGCGCGGCGCTGGCCAACATAATGTCGGCGCGCGCCCAATATCGGGTACAGCGCGCGGCCCAACTGCCAACGCTGACGGGTGATGCGGGGGCGAATGTCACCCGGCAAAATGACAGCTATAGCGCCGACATCGGCATCAGCGCCTTCGAAATCGACTTGTTCGGTCGGGTCCGCAGCTTGAGCGAAGCGGCGCTGGAAAATTATCTGGCCACGCAGGAGGGCGCCCGCGCCGCGCGCATCGCCCTGATCGCGGAAACCGCGACGGCCTATGCAACGCTGGCTGCGGATCGGGAATTGCTGGACCTGTCCCGCCAAACGCTCGCCAACGCAGAGCGTAGCCTGAAGCTGACCCAATCGCTCAACGGCGCGGGGCTCAGCGGCAAGCTCGATGTCTTTCAGGCGCAAACCATAGTGGAACAGGCCGCGTCGGACGTCGCCGTCAATGTGACGCAGGTGGCGCAGGACCGCAATGCGCTGGACCTGCTGGTCGGTGCCCCGATCGGTGATGCGTTGCTGCCAACCTCGCTCGATGGCTTGATCGCGGGGATCGCAAGAGTGCCTGCTGGTCTGTCGTCCGACATGCTGCTCCAGCGACCCGACATCTTGCAGGCCGAGCATCAGCTTAAGGCCGCCAATGCCAATATCGGCGCGGCACGGGCAGCGACGTTCCCGAAAATCAGCCTCACCTCGGCGATCGGCATTGCCAGTTCGGCGCTCTCCTCGCTCTTTACCGGCGATGCCTTCACCTGGTCGGCCAGCCCGTCCGCCACCATGCCGATATTCGGCGGTCCCGCCCGCGGCAATCTGGATTATAGCAAGGCACAGCGCGACCTGGCGCTGGCGCAATATGAAAAAGCGATCCAGACCGCCTTTCGCGAAGTCGCCGACGCGCTGGCGCGCGACGGCACGATCGACGCGCAACAGGCGGCTCAACGCCGTCTGGTCGCCGCCAGCCAGCGCGCCTATGATCTGTCCGAACAACGCTACCGGTCGGGAATCGACACATTCCTGAACACACTCGTCAACCAGCGGTCGCTCTATAGCGCTCGGCGGACCGCAATCGCCACGGACCTTGCGCTCGCCAGCAACCGGCTGCGGCTATACAGGGTCATCGCCGCCGACCAGTAG
PROTEIN sequence
Length: 452
MNRTALPSVAGLMLAACTMAPAYERPAPPIPAMLPTGEAYAPAQVGVQPRLAWGQVVSDPALRTVIERALANNRDLRAALANIMSARAQYRVQRAAQLPTLTGDAGANVTRQNDSYSADIGISAFEIDLFGRVRSLSEAALENYLATQEGARAARIALIAETATAYATLAADRELLDLSRQTLANAERSLKLTQSLNGAGLSGKLDVFQAQTIVEQAASDVAVNVTQVAQDRNALDLLVGAPIGDALLPTSLDGLIAGIARVPAGLSSDMLLQRPDILQAEHQLKAANANIGAARAATFPKISLTSAIGIASSALSSLFTGDAFTWSASPSATMPIFGGPARGNLDYSKAQRDLALAQYEKAIQTAFREVADALARDGTIDAQQAAQRRLVAASQRAYDLSEQRYRSGIDTFLNTLVNQRSLYSARRTAIATDLALASNRLRLYRVIAADQ*