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cn_combo_scaffold_12210_2

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(2207..3127)

Top 3 Functional Annotations

Value Algorithm Source
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 305.0
  • Bit_score: 569
  • Evalue 2.30e-159
2,3-dimethylmalate lyase (EC:4.1.3.32) similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 306.0
  • Bit_score: 522
  • Evalue 6.40e-146
methylisocitrate lyase n=1 Tax=Sphingobium xenophagum RepID=UPI00031C3FF3 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 306.0
  • Bit_score: 600
  • Evalue 1.10e-168

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Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
TTGCCCTATCTTCTCGCTGACGACCTTCCCACCGAATCCGCCGGCAAACGCTTCCGCGCCGCGTTGGAGCGTCCGGGCATCTATCGGCTGCCCGGCGCGCACAACGGCCAGGCCGCGATCCAGGCGCGCAACGCCGGGTTCGACGGGCTTTACCTGTCCGGCGCGGCGATGACCGCCTCTATGGGCCTGCCGGACCTTGGCATTATCACCGTGGATGAGGTGACATTCTTCATTCGCCAGATTGTGCGCTCTTCCGGGCTGCCGCTGCTGGTGGACGGGGACACCGGCTATGGCGAAGCACTTAATGTCATGCACATGGTCCGCTCTTTTGAGGAAGCGGGCGCAGGGGCGGTCCATCTGGAAGACCAGATCCTGCCCAAAAAGTGCGGACACCTCAACGGCAAGGCACTTGTCTCCCCTGTCGACATGGCCACCAAGGTCGCCGCCGCGAAAAAGGCAAGCCGCGACATCATGATCGTCGCGCGCACCGACGCCGCCGGGGTCGAAGGCTTCGATGCCGCTGTGGATCGCGCTAGGCTCTATGTCGATGCCGGAGCCGACGCGATCTTCCCCGAAGCACTGAACACTCGCGAAATGTTCGAAAAGTTCGCCGCAGCCCTCCCAAACATACCGCTCCTCGCCAACATGACCGAGTTCGGCAAGACCCCATTCTACACAGCCGATGAGTTCGAGGCGATGGGCTACAAGATGGTCATCTGGCCCGTCTCCTCGCTTCGTGTCGCCAACAAGGCGCAGAGCCTGCTCTATGCCGCGATTGCACGGGACGGCGGCGCACATGCCATGGTCGATGCCATGCAGACCCGCGCCGAGCTTTACGAGACGATCGGCCTCCATGCTTACGAAGAACTCGACGCGTCGATCGTGAAGACGATCGTGCCCGAAGCGGTCCCGCAGACCTAG
PROTEIN sequence
Length: 307
LPYLLADDLPTESAGKRFRAALERPGIYRLPGAHNGQAAIQARNAGFDGLYLSGAAMTASMGLPDLGIITVDEVTFFIRQIVRSSGLPLLVDGDTGYGEALNVMHMVRSFEEAGAGAVHLEDQILPKKCGHLNGKALVSPVDMATKVAAAKKASRDIMIVARTDAAGVEGFDAAVDRARLYVDAGADAIFPEALNTREMFEKFAAALPNIPLLANMTEFGKTPFYTADEFEAMGYKMVIWPVSSLRVANKAQSLLYAAIARDGGAHAMVDAMQTRAELYETIGLHAYEELDASIVKTIVPEAVPQT*