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cn_combo_scaffold_12509_1

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 3..1358

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000370D2D8 similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 451.0
  • Bit_score: 932
  • Evalue 1.80e-268
TonB-dependent receptor {ECO:0000313|EMBL:CCW16386.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 451.0
  • Bit_score: 886
  • Evalue 1.60e-254
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 463.0
  • Bit_score: 155
  • Evalue 5.10e-35

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1356
TTGACCGATCCGTTCGGGGATTTTGAAGGGCGGGCATCGCGTACATGGTGGGGCGCGCAGGCCAGCTATGAACAGGAAGCGGGTGACGGGCTGCTCTTCACATGGACTGGCGGCTATGACGATTATCATAAAGATTTCGTTGAAGAACTGGATTTTCGCAACGACAAGCCATTGACGCTTTTCGGCGCGCCATTGTTCCCGGATGGTATTCAACCCATCTCCCAACCTGTTGATATAAAAGCCTGGACCAGCGAAACCCGGCTGACGTCACGCGGCGACGGGCCGCTGCGCTGGCATGTAGGCCTGTTCTACCAACGGCTGGAGCGCGACCGGACCGATGATTTCGGGCCGCTGCTGTTCGGCAGCGAAGCGCTGCGCGCGGAAACCCGCTCCAGCCAGATCGGTGTTTTCGGGCAGGCGAGCTACGACATTGCGCCACAGGTCGAAGCCACGATGGCGCTGCGCTATGACCGCGACCGGCGCAAGGAAGATACGGTCGGTACCGTCACTGGAACGATTGTCGCGCAACGTGCCCGGACGTTCGAGAAATGGCAGCCCAAACTGTCCCTCGCCTGGCGCCCGACCGATCATCTGACCGCCTATGTCACCGGCGCGATCGGTTTCAAGGCGGGCGGCTTCAACCCCCTGCCCGGCCCGACCGATGTATGGCAGGCCGTGTTCCCGGCCGAAACCACCCGCTCGATCGAGGCGGGCGTCAAGGGTGAGAGCGCGGATGGGCGTATCCGCCTGTCGCTCGCGGGCTTCATCACTGACTATGACAATTTCCAGAACACCGTGTTCCTGGGCAACTCGGTCGTCCTGTCGGTGCCACAGGTCGATGTCCACGGGATCGAAGCGTCGGCGCAGGCGGCGCTTGGCGCGGGCTTCAGCCTGGATGGCGGGCTGGCCTGGACCCACAGCCGCACCGGCACCTATTTCACGCCCAACCCCACGCCAGAACCGGGTGAACCCGCTATCCTGGACATGAGCGGCAAGCGCACCCCCAACGCGCCGGACTGGACCATCAACAGCGGTATTGGCTGGCAGGGCGCGGCCGGACCTGCGACTGTCAATGTTCGGCTTAGTGTCGCCTATGTCTCACGCGTCGATTTCGAGATCGACAATATCCTCCATTCACCTGGCTACACCTCGGTCGATGGGCGTATAGGCGTCAGCCACGGGGCATGGACGTTTGACCTTTGGGCCAAGAACCTGCTCGACAAGCGCTGGGCGATCTCGGCTTTTGGCCAGCAGCAATTGCCGCTACTGCTGGGCCTTGGCCCGGATGGACCGTTCGACAGTTTCACCATCAACACCGGCCGCCAATTCGGCGCCAGCGCATCCGTGCGCTTTTGA
PROTEIN sequence
Length: 452
LTDPFGDFEGRASRTWWGAQASYEQEAGDGLLFTWTGGYDDYHKDFVEELDFRNDKPLTLFGAPLFPDGIQPISQPVDIKAWTSETRLTSRGDGPLRWHVGLFYQRLERDRTDDFGPLLFGSEALRAETRSSQIGVFGQASYDIAPQVEATMALRYDRDRRKEDTVGTVTGTIVAQRARTFEKWQPKLSLAWRPTDHLTAYVTGAIGFKAGGFNPLPGPTDVWQAVFPAETTRSIEAGVKGESADGRIRLSLAGFITDYDNFQNTVFLGNSVVLSVPQVDVHGIEASAQAALGAGFSLDGGLAWTHSRTGTYFTPNPTPEPGEPAILDMSGKRTPNAPDWTINSGIGWQGAAGPATVNVRLSVAYVSRVDFEIDNILHSPGYTSVDGRIGVSHGAWTFDLWAKNLLDKRWAISAFGQQQLPLLLGLGPDGPFDSFTINTGRQFGASASVRF*