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cn_combo_scaffold_12523_4

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(2845..4329)

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD n=1 Tax=Sphingobium xenophagum RepID=UPI0003102F9D similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 494.0
  • Bit_score: 943
  • Evalue 6.60e-272
Macrolide-specific efflux protein MacA {ECO:0000313|EMBL:CCW16231.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 494.0
  • Bit_score: 876
  • Evalue 2.40e-251
HlyD-family secretion protein similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 497.0
  • Bit_score: 720
  • Evalue 3.40e-205

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
ATGAGCAATGACACCACCACCGATCCGGCGCTGGACGAATTTCTGGGGGCAAAGCCTGCCAGGCCATGGCGCAAATGGGCCGTGCGCGGTGCGATCGGCGTCGGCCTGCTGCTGCTCGTGCTGCTTGTCAGCCGTTGTTTCGCGGGCGAGGATCAGCCCAGTTATGCGACGCGCGAAGTGCGCCAGGGCGACCTGACCGTCAGCGTATCGGCCACCGGCAATCTGCGTCCCGTCAATCAGGTCGATGTCGGGTCGGAACAATCGGGCAAGATCACCGCCGTCTATGTCGATGTGAATGACCGGGTCGTGAAGGGCCAGCGTCTCGCTGAACTCGATACGCGGCGCCTGGTCGACGCGGTGAACCAGAACCGGGCACAAGTCGCGGCGGCGCAGGCGCAGGTCTCGCAGGCGCAGGCGCAGGTCGCGCTGGCCAAGGCGACGCTGGACCGTCAGCTGAACGTGTTCCAGCTGTCGGGCGGCAAGGTGCCCGCGAAAACCGAAATCGATTCAGCCCGCGCCAATTATGAGGGCGCGCTGGCCACGCTGCGATCGGCGCTGGCTCAGGTGGACGTATCCCGCGCGCAGCTGTCGTCGGCGCAAACCAACCTGACCATCGCCCAGATCGTGTCGCCAGTGAACGGCGTCGTCCTGTCGCGCGACATCGAACCGGGCCAGACCGTCGCCGCCTCGCTCAACGCCCCGGTCCTCTTCACCCTGGCCGAAGACCTGACCCAGATGGAGGTCGAAGTCTCGGTCGATGAGGCTGATGTGGGTCAGGTGAAGGAAGGCCAGAGCGCGACCTTCGCGGTCGACGCTTTCCCTGGCCGCAATTTCCCGGCGAAGGTTACGCGGGTCAATGTCGGGTCGAACAGCGCCAGCACCGCGTCGTCATCCACGACCAGCACGGCCAGCAGCTCGTCCGGCACCGTCGTCGCCTACACAGCCGTGCTGAGCGTCAACAACAGCGATGAAACGCTGCGCCCCGGCATGACGGCAACCGCCGACATCGTGACGCAGGAATTGCGCAACGTGCTGCTCGTCCCCAACGCCGCGTTGCGTTTCAAGCCAAGCGCGGGCGCAGGCCGGGGTGGCGGCATCACCAGCACGCTCATCCCCCGCCGCCGCGGCAATCGCCCCACCCGCGAAGTCAGCTTCGGCGCGGGCAGCAGCCAGACTGTCTATGTCGTGGGCGAAGACGGCAAGCCCAAGGCGATACAGGTCGTCGTCGGCGCCAGCGACGGGTCGCGCACCGTCATCACCGGGGGCGACCTGAAACCGGGCATGCGCGTCATCACCGGGCAATTGGCGGCGGGCCAGGAACCGCCAGCCGAAGATCAGGCGCGCACCGGCGCGGACCAGCGCGCGCCACGCAAGGACAGCGCGCCGCGCAACCCGGCGACCGACGGCACGCCCGCGACCGTGGGCAAGCTCGGCAATTCGGGCGACGCCGCGCCGCAAACCGCCCCCGTGACGGCCAAGCCCTGA
PROTEIN sequence
Length: 495
MSNDTTTDPALDEFLGAKPARPWRKWAVRGAIGVGLLLLVLLVSRCFAGEDQPSYATREVRQGDLTVSVSATGNLRPVNQVDVGSEQSGKITAVYVDVNDRVVKGQRLAELDTRRLVDAVNQNRAQVAAAQAQVSQAQAQVALAKATLDRQLNVFQLSGGKVPAKTEIDSARANYEGALATLRSALAQVDVSRAQLSSAQTNLTIAQIVSPVNGVVLSRDIEPGQTVAASLNAPVLFTLAEDLTQMEVEVSVDEADVGQVKEGQSATFAVDAFPGRNFPAKVTRVNVGSNSASTASSSTTSTASSSSGTVVAYTAVLSVNNSDETLRPGMTATADIVTQELRNVLLVPNAALRFKPSAGAGRGGGITSTLIPRRRGNRPTREVSFGAGSSQTVYVVGEDGKPKAIQVVVGASDGSRTVITGGDLKPGMRVITGQLAAGQEPPAEDQARTGADQRAPRKDSAPRNPATDGTPATVGKLGNSGDAAPQTAPVTAKP*