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cn_combo_scaffold_5720_3

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(1974..2921)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRC0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 320.0
  • Bit_score: 262
  • Evalue 7.40e-67
Uncharacterized protein {ECO:0000313|EMBL:KDP87255.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 315.0
  • Bit_score: 279
  • Evalue 4.80e-72
Transcriptional regulator, LacI family similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 315.0
  • Bit_score: 271
  • Evalue 2.60e-70

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Taxonomy

Cupriavidus sp. SK-3 → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
GTGTCTCCCGTCACTGTCTCCCGCGTCATCAACACGCCAGCCCTGGTAACCGAGAAGACCAAGCTCAAGGTGCAGCAGGCGATTGCCGATCTCGGTTATGTGCCCAACCTGCTGGCCGGCGGGCTTGCGTCCAACCGGAGCCGGATCATTTCCTTCATTGTGCCGGGGACTCATCTGCTGCTCTTCAATGAGACCGTGCAGGAAATCGTGCTGCGTATGGCAGAGGCCGGCTATCAGGTTCTCGTTGGCTTCGGGGGGAGCAACGATTCTGCATTCAACGAGTCTGTGCTGAGTGCGCTGGCCCGGCGGCCGGACGGCATGATCCTGATCGGCTCTGCCCCGAACAAGGTGACGCGCGAGCGCTTGCTGGCAGCACGTATTCCGGTCGTGGAAGCGTGGGATAGTCCACGCCGGCCGGTGGACATGGCTGTTGGCTATTCGCTGGAGGATATGTCTCGCGAGATCAGCGAGTTCGTTATCAGCAGTAGCTATCAGCGGCCCTTCTTTTGCTGGGGGTTGGGGCCGCGCGCTTTGGCTATCCGTCACGGCATCACGCAGGCGCTGGTGGAGGCGGGCCGACCGGAGCCCGGCTTTCTCCAATATAGTTTCCCCGGCCTGTTCAGTGATGGCCGTCATGCGATCAATCATATCTGCGAGCTGCCCGAGCGGCCGGACCTGCTGTTGTGCATCTCCGACTGGATTGCCCACGGCGCACTGACCGAGGCGCGCTATCGCGGCATTTCTGTGCCTGGAGACTTGGGGGTTTGCGGCTTCGGCGACCAGGATTTTGCCGCGCATATCGATCCGCCGCTGACGACGGTGCGTATTGATGGGCGGGAGATCGGTCGGGTGGCCGCCGAATTGTTGCTGGCGCGTCTGCAAGGACGTGAACCACCGGAGCGGAGCGTCGACGTCGGGTTTGAGCTGGTCCGTCGTAAAAGCGCCTGA
PROTEIN sequence
Length: 316
VSPVTVSRVINTPALVTEKTKLKVQQAIADLGYVPNLLAGGLASNRSRIISFIVPGTHLLLFNETVQEIVLRMAEAGYQVLVGFGGSNDSAFNESVLSALARRPDGMILIGSAPNKVTRERLLAARIPVVEAWDSPRRPVDMAVGYSLEDMSREISEFVISSSYQRPFFCWGLGPRALAIRHGITQALVEAGRPEPGFLQYSFPGLFSDGRHAINHICELPERPDLLLCISDWIAHGALTEARYRGISVPGDLGVCGFGDQDFAAHIDPPLTTVRIDGREIGRVAAELLLARLQGREPPERSVDVGFELVRRKSA*