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cn_combo_scaffold_5720_6

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 4959..5849

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein CpaB n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B71C78 similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 300.0
  • Bit_score: 241
  • Evalue 9.70e-61
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:KFG89637.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 310.0
  • Bit_score: 249
  • Evalue 6.50e-63
Flp pilus assembly protein CpaB similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 303.0
  • Bit_score: 240
  • Evalue 8.00e-61

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Taxonomy

Sphingobium herbicidovorans → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
GTGGCAAACAGGCGCAACATTCTGGTCTTGGGCGTCGCCCTACTGCTCGGCGCGCTGGCGGTATACATCGTCAATGCATATTTTTCGGGCATGGAGCGCCGCAATCAACGCATCGCCGAAGAACTCAATCTGACAGCCGTTGTCGTTGCTAGCACGACCCTTAACTATGGCGACGCGATCAGCGCCGACAGGCTCAAGATCGTGCAGTGGCCATCCTCTTCGGTTCCTGCGGGCGCCTTTACCGATATTCGCGCTGTGCTCTCCGGCAATGGCGGCCCGCGCGTCGCGCTGCGCACCATCGAGCCGGGCGTGCCGCTCCTTCCCGCCATGCTTTCCGGCCCTGGTGGCCGCGCCGTCATTTCCGCGACGCTGCCCGCCGACAAGCGCGCCGTTGCGATCCGCGTCAACGAAGCCTCTGGCGTCGGCGGGTTCGTCTTCCCCGGCGATAGTGTCGACGTGTTGCTCACGCGCCAGCCCGCGACCAGCGGCGCCACCCAGGCCGAGCAGATCACCGACACCATCGTCGAGAATGTCCGCGTGATCGCGACAGACCAGAATGCCAATGACGCCAGCAAGGATCCCCAGGTCAGCAAGACAGTGACGCTCGAGGTCGATCCGGTGCAGGCGCAGAAAATCGCGCTCGGCGGACAGATCGGCCAGCTTTCGCTGGCGCTGCGCAATGTCGCGGATCGCGATCCGACCGAGACGAAGACCGTCACCGTCGCCGATCTCGGCACTGGCGGCTACCCCTTCTACACGGCGCCACCCGCGATGCGCGCGCCGGTCTATCGGGCCGGGCCCCGCGCCGCCGCGCCACCGCGCCCCGCCGGGCCGAGCGTGATCGTGGGCAAGGGTCTCAGCGTTTCCAAGGTCGAGGTGTCCCGTGACTAA
PROTEIN sequence
Length: 297
VANRRNILVLGVALLLGALAVYIVNAYFSGMERRNQRIAEELNLTAVVVASTTLNYGDAISADRLKIVQWPSSSVPAGAFTDIRAVLSGNGGPRVALRTIEPGVPLLPAMLSGPGGRAVISATLPADKRAVAIRVNEASGVGGFVFPGDSVDVLLTRQPATSGATQAEQITDTIVENVRVIATDQNANDASKDPQVSKTVTLEVDPVQAQKIALGGQIGQLSLALRNVADRDPTETKTVTVADLGTGGYPFYTAPPAMRAPVYRAGPRAAAPPRPAGPSVIVGKGLSVSKVEVSRD*