ggKbase home page

cn_combo_scaffold_5720_7

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 5842..7311

Top 3 Functional Annotations

Value Algorithm Source
Pilus assembly protein CpaC n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIT7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 495.0
  • Bit_score: 554
  • Evalue 1.50e-154
pilus assembly protein CpaC similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 495.0
  • Bit_score: 553
  • Evalue 5.40e-155
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55 similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 491.0
  • Bit_score: 583
  • Evalue 3.20e-163

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_10KDA_Sphingopyxis_64_55 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
GTGACTAAGCGTTCCCGCTCCGCAAGCCAGATTGGCAGGCTGCTTCTGGCCGTCGCCGTCACCGGGATCGCCGGGCAGGCCGCATATGCCGCGCCGCTCCCTTCCTCCTGGCAGGCGCCCGACGGACCGGCGACCGCCGGACAGCTCGACGTGCCGCTCAACAAGAGCCAGATGCTGACGGTGGATCAGCCGGTCGGCCGGGTGATGGTGGGCAATCCCGAGATTGCGGACATCATGCCGATCACCAGCAAGAGCATCTATGTGCTCGGCAAGAAGCTGGGCACGACCAGCCTCACCGTGTTCGACAAGGCGGACAAGGTGATGGCGGTGGTCGATGTGGCAGTGGGGCCGGATATCGTCTCGCTGCGGCGCCAGCTGGCCGAGCTCATGCCCGGTGAAAAGATCGGCGCCAGCATTTCCAACGACGCGATCGTGCTGACGGGCATCGCATCGAGCGCGCCCTCCGTTGACCGGGCCGTGCAGCTGGCTCGCACCTATGCGGGCGAGAAAGTCGTCAACATGGTGTCGGTCGGCGCCAGCCAGCAGGTGATGCTGGAAGTGCGTTTCTCCGAAGTGCAGCGCGATACCGCCAAGCGGCTCGGCCTCGGCTCCTTCATCGGCAGCCAGAGCGGCCGGTTCGATGGCGTGTTCGGCAACGGCTCGCAACTGGTGCCGGACCCGGCGACGGGCGCGGGGATCATGCAGCGCTCGGCGATCACGGACACGTTCGGCGTGTTCCGCCAGCTGTTCGACATCGGTGGCGTCCGCATCGAGGCGACGCTGGACGCGCTCGAGAACAAGGGGCTGGTCAAGACGCTCGCACAGCCGACGCTCATCGCGCTGTCCGGCGAGACGGCGTCCTTCCTGGCCGGTGGCGAATTCCCCATCCCGGTCGTGCAGAGCGGCAACACGAACGGCACCAGCGCTCAGGTCACGGTCGAGTTCAAGCCATTCGGCGTCAGCCTGGCCTTCACGCCCACCGTCCTCGCCGATGGCGTGATCAGCCTGTCGGTCGAGCCGGAAGTGAGCGCCATCGATTCCAGCGCCGCCGTGCAGGTGAACGGCCTCGTCATTCCGGGCCTGCGCACACGCCGCGCCAGCACCGTGCTCGAACTGCGCGATGGTGAAGCGTTCGCCATCGCCGGACTGATGCAGAAAGATTTCGGCACGACCGTCCGCCAGCTACCGGTGCTTGGGTCCATCCCCATCCTCGGCACGCTCTTCCGCTCCTCCGGCTTCGAGCGGGGCGAGACGGAGCTGGTGATCGTGGTGATCCCCCGCCTGGTCAAGCCCGTGAAGCCGCAGCAGATTTCGCTCCCCACCGACCGGGTGAAGGATGCACGCGAGGGCGACCTGTTCCTGCTCGGCCGTTCGGACGGCACGGTGCCCGTCATCGCGGAACCTGAAAAGCCGGATAGCAACGCGGGTGCGGCGACCAAGGAGAAGAAGGCCAATGGCTATGAATATTAA
PROTEIN sequence
Length: 490
VTKRSRSASQIGRLLLAVAVTGIAGQAAYAAPLPSSWQAPDGPATAGQLDVPLNKSQMLTVDQPVGRVMVGNPEIADIMPITSKSIYVLGKKLGTTSLTVFDKADKVMAVVDVAVGPDIVSLRRQLAELMPGEKIGASISNDAIVLTGIASSAPSVDRAVQLARTYAGEKVVNMVSVGASQQVMLEVRFSEVQRDTAKRLGLGSFIGSQSGRFDGVFGNGSQLVPDPATGAGIMQRSAITDTFGVFRQLFDIGGVRIEATLDALENKGLVKTLAQPTLIALSGETASFLAGGEFPIPVVQSGNTNGTSAQVTVEFKPFGVSLAFTPTVLADGVISLSVEPEVSAIDSSAAVQVNGLVIPGLRTRRASTVLELRDGEAFAIAGLMQKDFGTTVRQLPVLGSIPILGTLFRSSGFERGETELVIVVIPRLVKPVKPQQISLPTDRVKDAREGDLFLLGRSDGTVPVIAEPEKPDSNAGAATKEKKANGYEY*