ggKbase home page

cn_combo_scaffold_6097_4

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(2658..3287)

Top 3 Functional Annotations

Value Algorithm Source
amino acid transporter n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB93D similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 209.0
  • Bit_score: 307
  • Evalue 1.00e-80
DNA, contig: SP658 {ECO:0000313|EMBL:GAN15482.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 208.0
  • Bit_score: 304
  • Evalue 1.20e-79
amino acid transporter similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 207.0
  • Bit_score: 288
  • Evalue 1.40e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGACGTGGCATATGTGGTGGTTGTTCGTGGCGGCGGTCTTCGTGCTTTCCGGCACGCCGGGGCCGAACATGCTCCACATTCTTTCGCGCAGCGTTGAGCTGGGCCTGCGCCGCGCCGTGGCAGCGATGATGGGTTGCCTGCTTGCGATCATCACCGTGTTGACCGCGTCCGCGCTGGGGCTGACGGCGCTGCTGCTCGCGGTGCCCGGCCTGTTCGATGTGCTGCGCTATGCCGGCGTTGCCTATCTCGTCTATCTGGGCGTGAAGGCCTGGCGCGCCGACACCGGGCCGATCGACATCAGCGAGAGTGCCGCTTCCCTGCCGCTGTCGCATGCCCATGTCTTTCGCGATGGCTTCCTGATCGGCGTGAGCAATCCCAAGTTGCTGCTGTTCGCCGCCGCCTTCTTCCCGCAATTCATCAATCCCGCCGAGGCGCAGGCGCCGCAATTCGCGATTCTGGTCGCGACCTTCGGCGTGATCGAGTGCGGCTGGTATCTGGTCTACGCGCTTGGCGGCCGGTCGCTGGCTCGTGCGCTCACGCGTCCGGCTCTCAAGCGTGCGTTCAACCGGCTGACCGGCAGCTTGTTCATCGGCTTCGGCCTGCTGCTGTTGCGGACGCGGCCGAACTGA
PROTEIN sequence
Length: 210
MTWHMWWLFVAAVFVLSGTPGPNMLHILSRSVELGLRRAVAAMMGCLLAIITVLTASALGLTALLLAVPGLFDVLRYAGVAYLVYLGVKAWRADTGPIDISESAASLPLSHAHVFRDGFLIGVSNPKLLLFAAAFFPQFINPAEAQAPQFAILVATFGVIECGWYLVYALGGRSLARALTRPALKRAFNRLTGSLFIGFGLLLLRTRPN*