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This organism can only be binned in the context of its binning project CG1_02_SUB10. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

cn_combo_scaffold_6234_1

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 2..229

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS298 n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HDV1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 75.0
  • Bit_score: 154
  • Evalue 5.20e-35
Transposase IS298 {ECO:0000313|EMBL:EQB11182.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosute similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 75.0
  • Bit_score: 154
  • Evalue 7.20e-35
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 74.0
  • Bit_score: 150
  • Evalue 2.10e-34

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Taxonomy

Sphingobium lactosutens → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 228
GACCAGGGTGCTACGCCCAACATCCCGCCGAAGTGCAACCGGAAGTGGAAGCCCTGTTTCAGCAAGCGGCTCTATCGCGAGCGCAACCTGATCGAGCGGTTCTTCTCCAAGCTGAAGCACTTCCGCCGCGTCGCTACTCGTTACGACAAGCTCGCCGCCAACTTCCTCGCCATGATCCAGCTCGCCTCAATGCGCCTTTGGATGCGTGCTTATGAGTCTACGGCCTAG
PROTEIN sequence
Length: 76
DQGATPNIPPKCNRKWKPCFSKRLYRERNLIERFFSKLKHFRRVATRYDKLAANFLAMIQLASMRLWMRAYESTA*