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cn_combo_scaffold_6588_2

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 2787..3665

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingobium xenophagum RepID=UPI0002FFC6A8 similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 292.0
  • Bit_score: 571
  • Evalue 5.30e-160
Transcriptional regulator {ECO:0000313|EMBL:CCW16811.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium j similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 292.0
  • Bit_score: 561
  • Evalue 7.70e-157
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 293.0
  • Bit_score: 519
  • Evalue 6.70e-145
  • rbh

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGCGCAGATTGCCGCCCCTTACGGCCCTGGAGGCCTTTGTTCAGGTTGCGCGCCTTGGCTCGGTCAAGGCTGCGGCGGAAGAACTCGCACTCTCGACTCCAGAGCTCAGCCGCCGCGTTCAGGCGCTGGAGCGCTTCATCGGCCGCCCACTGTTCGACCGCAAGCATCAGGCGCTGGAAATCAATGCTGAGGGGCAGAGGCTGCTGGACGATATCGCGCCAGCCCTCGATTCCCTTGCGCAGGCGCTGGAAAATATCCAGAGCGGCGGCAACCAGTTGCGGCTGCGACTGGCGGTCATGCCCCTGTTCGCAACCCAAAGGCTGTTTCCCCATCTGGGCGCGCTGCGCGCGCTGCATCCGCAATTGCACATCGACATCGAAACGACGCCCCATGCCGTCGCCCGGCTGGGTGAAGGGCTGGACGCGGCGATCGTGCTGGCCAAGGATATCGACGCCGCGCTCTATGCGCATGAACTGGATCATGACGAAGTCTATGTCATCGGCGCGCGATCTCTGCTCGAATCGCCCCATGCGCTGACGTCGCCGGGGGAACTGGCACAGCATACTGTGCTGCTCCACCGCGACATGCCGTTGGCGTTCGATGCCTGGAAGGAAGCGGTCGGCCTGCCCGACCTGCAACCGCTGGCGACGGACAATTATGATTCAGGACAGTTGATGCTGGAAGCGGCAGCACAGGGGCTTGGCGTCGCCTTCATGCACGCCAGCCATTTCAAGGAAGCTGCCGACAACCGGCTGGTCCGCCTGTTTCCGATCCGCGTCGAAAGCCCCTATCGCTATTATTTCGTCTGTCGTCCCCGCGCGCTCCAGACCCGCGCCGTGCGTATCTTCCGCGACTGGTTGATCGCCGCCGATATCTGA
PROTEIN sequence
Length: 293
MRRLPPLTALEAFVQVARLGSVKAAAEELALSTPELSRRVQALERFIGRPLFDRKHQALEINAEGQRLLDDIAPALDSLAQALENIQSGGNQLRLRLAVMPLFATQRLFPHLGALRALHPQLHIDIETTPHAVARLGEGLDAAIVLAKDIDAALYAHELDHDEVYVIGARSLLESPHALTSPGELAQHTVLLHRDMPLAFDAWKEAVGLPDLQPLATDNYDSGQLMLEAAAQGLGVAFMHASHFKEAADNRLVRLFPIRVESPYRYYFVCRPRALQTRAVRIFRDWLIAADI*