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cn_combo_scaffold_7743_4

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 2175..3500

Top 3 Functional Annotations

Value Algorithm Source
two-component sensor histidine kinase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C7B4 similarity UNIREF
DB: UNIREF100
  • Identity: 36.3
  • Coverage: 444.0
  • Bit_score: 249
  • Evalue 6.90e-63
Sensor histidine kinase {ECO:0000313|EMBL:GAO56049.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 440.0
  • Bit_score: 326
  • Evalue 4.80e-86
integral membrane sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 459.0
  • Bit_score: 229
  • Evalue 2.10e-57

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGAGTCTGAGCCTGAACCACTTGCGGGGATGGCGCATTTCCCGCCAGATTGGGCTTCTCGTCATTGCCGCGCTTCTGTTGCTGATCGGGGCCAATTTCATCGTGACATTCGTTGGGCCGCCGCCACGGCCAGCGCCCGTACTGGCAAGCGACCTTGTCGATGCGCTGAAGGGGCGCGATCTTCCGGATCGGCCGGTCGTCCTGATGGTCCGGGAAACGGCGCCCACGGTGTTTGTGCCTCGGTCGGGGGAAAAGCGCCGGACAGACTATGAGGAACCTATTGCCCGGCTGATTGGTCGCCCCCCGGAGAGCGTCCGGTTCGCAACGGCAGAGATGCCACATCCCGGGCCGCGCGGCGAAGCGATGCCGCCCGCTTTCTTCGGCTCATTTTCCGCCGGGGTGAGGGATGAGTCGAACCGCTGGCTCGTCGTTCGCAGTGCACCGCAGCCGTTGTTGACGGCCTGGCATCGCACGACCTTGACCATCACGATCGGGGTAGCTCTGCTACTCGCGCTCATCGCCTTGTGGGTTAGCCGTGGGATCGTGTCGCCGATCCGTCGGCTGTCGGAGCAGGCCGATCAGGCCTATCTCGACGGCAAGCGGGGTGAGATCAGCGTCAATGGCCCGCCGGAAATTGCTCAACTCGCCGTCACGATCTCGGCGATGCGTGACCGGTTTGTCGATCTGGTCGACAGCCGCACCATGATGCTCGCGGCCATTGCGCATGACATGGCGACGCCTCTCGCGCGGCTGGAATTTCATGTCGCGAAGCTTCCAGCCAATGTGCGCAGCCAGGCTGAGGCGGACCTGGCCGAACTTTCGGCCCTGATCGCCAGCATCCTTGGCTATGCGCGCGGGCAACAGCGGCTGGAGTCGACCCCCGTCGATCTGGTGGGGCTGACGCGTGATTTGCTGGAACGATGGGACCGGGCCGATGCGCCGATCCGGCTTATGGGGGCACCGCAGGCGGCCTGGCTGCATGGCGACCGGCTGTGGCTTCAGCGGCTCATCGGCAATCTGATCGGCAATGCTCAGCGCTATGCCGGTGGCGGCAAGATCGACATCGAAGAGACTCAAGGCGCGATCGTGCTGACGGTTCGCGATGACGGGCCAGGGTTCGACCCAGCTCTGGCGGAGCGTCTTTTCGAACCTTTTTTCCGCATCGAGGCCTCGCGTAGTCGGGAAACGGCAGGGGCCGGCCTCGGCCTCGCCACGGCCCGGGCCATTGCTGAGGCCCATGGCGGAACCCTCATGGCCCAATCCGCACCGGGCCGGGGTGCACAGTTTATTCTGACATTGCCAAGGGCGGCGAATATCCAGCCCTGA
PROTEIN sequence
Length: 442
MSLSLNHLRGWRISRQIGLLVIAALLLLIGANFIVTFVGPPPRPAPVLASDLVDALKGRDLPDRPVVLMVRETAPTVFVPRSGEKRRTDYEEPIARLIGRPPESVRFATAEMPHPGPRGEAMPPAFFGSFSAGVRDESNRWLVVRSAPQPLLTAWHRTTLTITIGVALLLALIALWVSRGIVSPIRRLSEQADQAYLDGKRGEISVNGPPEIAQLAVTISAMRDRFVDLVDSRTMMLAAIAHDMATPLARLEFHVAKLPANVRSQAEADLAELSALIASILGYARGQQRLESTPVDLVGLTRDLLERWDRADAPIRLMGAPQAAWLHGDRLWLQRLIGNLIGNAQRYAGGGKIDIEETQGAIVLTVRDDGPGFDPALAERLFEPFFRIEASRSRETAGAGLGLATARAIAEAHGGTLMAQSAPGRGAQFILTLPRAANIQP*