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cn_combo_scaffold_8447_4

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(4053..6152)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TraD n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IZ71_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 699.0
  • Bit_score: 1374
  • Evalue 0.0
Conjugal transfer protein TraD {ECO:0000313|EMBL:EQB14979.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 699.0
  • Bit_score: 1372
  • Evalue 0.0
VirD4/TraD-like protein similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 701.0
  • Bit_score: 1106
  • Evalue 0.0
  • rbh

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Taxonomy

Sphingobium lactosutens → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2100
GTGAGCATTTTCCGCAACGACACACTGGGCTCATGGACCCGCGGCGGACAGGCGATCGTCCATAATGTCCGCATGACGACGCAGGTCTTCTACCAGACCCTGTTGGCCAGCTTCATTATCTGGATCATCGGCACCCTCTGGTATGCGTTCGAGAAGTCGATGGAGTATGAGCGTTTCGTCCTGCTCAAGCTGGCCGAGGCCATGATCAAGGTCGATGCGGCAGCCGGTACCAACGATCCCGTGCAGTTCCGCACGCCCGAAGGCCAGGCCTACTGGACTTCGGCGGACTGGCTCGTCGCGTCCAGCCTGGCCAGGAAGACCTTGCATGCGTTCGAGGTCTATCTGCTCCATGGAGCGCTGATCTCGGGCCTGTTCAGCCTCGTCATGCTCGCCTGGGCCTGGTTCTATTTCACCCGAACGGGAAGGGGGCTTGGCTCCAATGAATATCTGCGCGGGGCGCGTTTCGGCACGATCCGGCAGGTCAAGCGCGCACTCTGGCGCCAGGCCAAGGGGCCGCTCCTGATCGGCAAAGTGCCGGTGCCGCAAGCCTATGAGCCCGAACATATCCTCCTGTGCGGCGCGCCTGGCACGGGAAAGACCAACCTCATCGTCGGCATGCTCGACGGCATCCGCAAATCGGGCCGGCGCGCCATCGTCTATGACACCGCCGGCACCTTCGTCGAGAAATTCTACCAGCAGGGCACCGATATGCTCCTCAACCCGCTCGATCAGCGTACGGCGCGCTGGTCACCCTGGGTCGATGTGCCGCGCGACTATCATTATGACCAGATCGCCGAATCCACCATTCCCGACAAGCATGGCGATCCCTTCTGGGCGAAGGCGGCCAGAGGCACGCTGGTCGCGGTGATGCGCAAGCTCGCCCGCCAGAAACACACTTATGTCTCCGTCCTGCTCGACAGGCTGCTTCGCTCGAAGCTCAAGGACCTTGCAGCCTTTGTCAGCGGTACCGATGCGGCCGCCTTCATCAGCACCGAAGGCGAGCGCACATCCGCGGGCATCCAGGCCGAACTCGCCTCGGTGATGCGCAGTTTCGGCTATCTTGACGATACCGACGACGGCTTCTCGATCCGCGATTGGGTCGAGAAGGGCGAGGAGGGAAGCTGGCTCTTCATTACGGTGAAAGCCGACCAGCTTCCCTCGCTGCGCCCGCTCATCACCGTCTGGCTGGATATCGCGATCAGCGCGATCATGAGCCTGTCCCCCGATCGCGACCGCCGCCTCTATTGCGTGATCGATGAATTGCCGACGCTGCAGAAGCTGCCATCGCTCTCGGACTTCCTCGCCCGTGCCCGCAAATATGGCGGGTGCGGCATATTGGGCTTCCAGTCCTACCCGCAACTCGAAGCGACCTATGGCATCCAGGATGCTGCCGCCATCACCGGCTATTGCTCGACCTGGGTCGCGCTGCGCGCCAACGACACAGCGACCGCAAAACATGTCTCGGAAAATCTCGGCCAAGTCGAACAGGTCGAGGCGAACGAGGGCATGTCCTATGGCGTCAACGACATGCGGGACGGCGTCAACCTGTCACGCATGCAGGTGACCCGGCCGCTGGTCATGCCGACCGAGGTCACGAACCTTCCCAATTTTGTCGGCTTCCTTCGCTTCGGCCGCAATCTTCCGGTGGTGCGTTTCGACAGCGCCTTCAACGCTGTTCCGTCGCTCGGACCGGCCTTTCTCGAACGCACCGATCCACCGGTGCTGGTCGACAAAGCCAGGGACCTGGTTCGTATCGCCCATGCCGAAGCCTGGGTCAGGGAAGCCATCGAGCGAGAAAGCGCACAGAATCCGCCACCTCCGACACATCCACAAGCGCCCGCAGACGTGCCGGACAAGCTGCCGCCGTCATCGATGGCTCCCCGTACGCCACCACGGCAACCCGACCTGTTCAATCCGCCGCAGGCGAAGGTCGATCCAAAGCTGGTGGAAGATATCCTGCACGCCAGGGAAGGCGACGACTTGCCCGTCCCGCCACGCGAGGCCTGGACCATCCTCGCCGGCAAACAGGGGGAGATTCGCTCCGATCTTGTCCAGCATGGCCGCGATGATGGGCCACGTGAACCCGCGAAGCCGGCATGA
PROTEIN sequence
Length: 700
VSIFRNDTLGSWTRGGQAIVHNVRMTTQVFYQTLLASFIIWIIGTLWYAFEKSMEYERFVLLKLAEAMIKVDAAAGTNDPVQFRTPEGQAYWTSADWLVASSLARKTLHAFEVYLLHGALISGLFSLVMLAWAWFYFTRTGRGLGSNEYLRGARFGTIRQVKRALWRQAKGPLLIGKVPVPQAYEPEHILLCGAPGTGKTNLIVGMLDGIRKSGRRAIVYDTAGTFVEKFYQQGTDMLLNPLDQRTARWSPWVDVPRDYHYDQIAESTIPDKHGDPFWAKAARGTLVAVMRKLARQKHTYVSVLLDRLLRSKLKDLAAFVSGTDAAAFISTEGERTSAGIQAELASVMRSFGYLDDTDDGFSIRDWVEKGEEGSWLFITVKADQLPSLRPLITVWLDIAISAIMSLSPDRDRRLYCVIDELPTLQKLPSLSDFLARARKYGGCGILGFQSYPQLEATYGIQDAAAITGYCSTWVALRANDTATAKHVSENLGQVEQVEANEGMSYGVNDMRDGVNLSRMQVTRPLVMPTEVTNLPNFVGFLRFGRNLPVVRFDSAFNAVPSLGPAFLERTDPPVLVDKARDLVRIAHAEAWVREAIERESAQNPPPPTHPQAPADVPDKLPPSSMAPRTPPRQPDLFNPPQAKVDPKLVEDILHAREGDDLPVPPREAWTILAGKQGEIRSDLVQHGRDDGPREPAKPA*