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cn_combo_scaffold_8447_6

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 6878..7390

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL30_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 172.0
  • Bit_score: 237
  • Evalue 8.10e-60
TetR family transcriptional regulator {ECO:0000313|EMBL:EIL87921.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 172.0
  • Bit_score: 237
  • Evalue 1.10e-59
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 172.0
  • Bit_score: 236
  • Evalue 6.60e-60

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGGATACACGCGACGCGCTGCTCAATGCGGCCTTGACGGTTCTCGAGAAAGACGGCGAGTCACAGTTTTCGACGCGCAAGATTTGCGCGATAGCGAACGTGACCGCGCCGACCTTTTATCATCACTATGGTAATGTGGAAGGACTTCTGAGCGCAGCCATTGCGGAAGCGTTCACCCAGTTTCTCGAACGCACGAGAATTGCAGTGCAATCCGCTAATGCGGTAATGGCGCTGCGTGAGGGGTGGGAGGACTATGTGCGTTTCGCGGCGGCGCATATTAGGCTTTCCGCGGCGATGATGAGACGTGTTCTTGATGACGCTGAGATCCCCGCCGCCACGCAGGCTTTCGCACTCCTTGTCGCACGTATCGACGCCATTGCTGTCACGGGGCGACTTGCGCTGACGGTAATGGCCGCCGCCGATCTCATATGGGCGTCGGCAAATGCGGCGTCCTTGCTTCACGTCACGGCCCGGTTACGCAAGGTGGTTCCGACATCCTCGGTTCTTGAGCAG
PROTEIN sequence
Length: 171
MDTRDALLNAALTVLEKDGESQFSTRKICAIANVTAPTFYHHYGNVEGLLSAAIAEAFTQFLERTRIAVQSANAVMALREGWEDYVRFAAAHIRLSAAMMRRVLDDAEIPAATQAFALLVARIDAIAVTGRLALTVMAAADLIWASANAASLLHVTARLRKVVPTSSVLEQ