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cn_combo_scaffold_8724_9

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 6543..7190

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II62_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 198.0
  • Bit_score: 218
  • Evalue 8.40e-54
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 198.0
  • Bit_score: 218
  • Evalue 2.40e-54
TonB-dependent receptor {ECO:0000313|EMBL:CCA91504.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 198.0
  • Bit_score: 218
  • Evalue 1.20e-53

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Taxonomy

Novosphingobium sp. PP1Y → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGCATCGCTTTCCATCCATATCCATGCGCACGGGCGGCCTGAGCCTTGCCGCTGTGGCGACGGTGCTGGCCTTCTCCGCGCCTGCCGCCGCAGCCGATCAGGACGCCTCTGGCGCTGCGACCACACCCGCCGCTGCCGCGCCCGCCGAGGCTGCGGACGCCGGCGAAGAACAGTCCATCGTCGTCACCGGCTCGCGCATTGCGCGCTCGGGCTTCAACACGCCGACACCGGTCACCGTGCTTGGCAGCGAGCGGTTGCAGACACTCGGCGTCACCAACGTTGCCGAGGGCCTGAACCAGCTCCCCAGCTTCCGCGCCTCGACCTCGCCAAGCAACGTGCAGTCGGCCGGCGGCAACGTCGGCGCGCGCGTGCTCGATCTGCGCGCGCTCGGTGCGCCGCGCACGCTGGTGCTGGTCGATGGTCGTCGCTTCGTGCCGAGCACGGGCGAAGGCACGGTCGACATCAACCTCATCCCCTCGGGCCTCATCCAGCGCACCGAGGTCGTCACCGGCGGCGCTTCCGCTGTCTATGGCTCGGACGCCGTGGCCGGCGTCGTCAACTTCATCCTCGATCGCAAGTTCACCGGCCTCAAGCTGGAGCTGCAGTCCGGCTTCTCGCAGAGGGGCGATGACCGCAACTGGTATGGC
PROTEIN sequence
Length: 216
MHRFPSISMRTGGLSLAAVATVLAFSAPAAAADQDASGAATTPAAAAPAEAADAGEEQSIVVTGSRIARSGFNTPTPVTVLGSERLQTLGVTNVAEGLNQLPSFRASTSPSNVQSAGGNVGARVLDLRALGAPRTLVLVDGRRFVPSTGEGTVDINLIPSGLIQRTEVVTGGASAVYGSDAVAGVVNFILDRKFTGLKLELQSGFSQRGDDRNWYG