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cn_combo_scaffold_9331_3

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(889..1518)

Top 3 Functional Annotations

Value Algorithm Source
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CCW16376.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CCW16376.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphi similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 209.0
  • Bit_score: 388
  • Evalue 6.40e-105
TetR family transcriptional regulator n=1 Tax=Sphingobium xenophagum RepID=UPI0002F182F1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 411
  • Evalue 3.80e-112
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 203.0
  • Bit_score: 260
  • Evalue 5.30e-67

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
TTGCCCCGACCGAACGCCGCACCATCCCCCTTCCGATCGCGCGAGGAACGTGAACGCGATCGTGAGGAGAAGCGCGAAGCCGTGCTGCGGGCCGCGGTACGCATGTTCAACGCGCGCGGTTTTCACGCCACCTCGCTCGACGACGTGGCCGCAAGCCTGGGGATCAGCAAGCCGACCATCTACCATTATCTGGGCAATAAGGAGCAGGTGCTGATCGAGTGCGTGACGCGCGGTCTGCAATTGCTGAGCGCTGCCGCGGATACGGCGCGCGCGCAGCCCGGCGATGGCCTTGCCAGGTTGCGCAGCGTCCTGCGCCGCTATGCACTGGTGATGATGGACGATTTTGGTCGCTGCGTCGTGCGCACTGGCGACGAATTTCTTTCTGCTGAGGGGGCGGCGCTGTTCCGCGCGCGCAAGCGGGCGATCGATCTGTCGATGCGCGCGCTGATCGAAGATGGCATCGCCGATGGTTCGATTGCGCCTTTAGACGTGCGCATGACCGCCTTCACCCTGGCGGGCGCGCTCAATTGGCCGGGGCGCTGGCATGATCCGGATGGGCCGCTCAGCGCCGAGCAGGTCGCCGATTCGCTGGTCGATATATTGATCAGCGGCCTCGCCCCACGCGCCTGA
PROTEIN sequence
Length: 210
LPRPNAAPSPFRSREERERDREEKREAVLRAAVRMFNARGFHATSLDDVAASLGISKPTIYHYLGNKEQVLIECVTRGLQLLSAAADTARAQPGDGLARLRSVLRRYALVMMDDFGRCVVRTGDEFLSAEGAALFRARKRAIDLSMRALIEDGIADGSIAPLDVRMTAFTLAGALNWPGRWHDPDGPLSAEQVADSLVDILISGLAPRA*