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cn_combo_scaffold_9347_2

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: comp(769..1425)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPX8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 221.0
  • Bit_score: 319
  • Evalue 3.50e-84
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 221.0
  • Bit_score: 319
  • Evalue 9.90e-85
TetR family transcriptional regulator {ECO:0000313|EMBL:BAK65806.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 221.0
  • Bit_score: 319
  • Evalue 4.90e-84

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGTCTGATCAGACGGCGGTGAGCAAAGCGAGCAAGGCCAGACCGGTTCCCGATCAGTCCAGTCGCGCCCGTTTCCTCGAAGCCGCCGACGATCAGTTCATCCTGCACGGCTATGATGGCTGCACCATCCGCGCGATCGCCGCGCAGGCCGGGACCAGCCTCGCCTCGCTCAGCCGTAACTGGACAAGCAAGCGCCATCTCTTCGAGGAAGTGTTCGAGCGTCATTTCGCGCCGATCCACGCAGCGCAGAATGCGAGCTTCGACGCGCTGGAGCGGGTCGGCAATGCCGGCGTGCGCGACATCATTCAGGCCTTCTTCGATTCAGCGCTCAGCCGCAGCGGCAGTGCCGGCGAGAACCGCAAGAGCCACATGGTCTATTGCTGCGCCCTCACCGATCCGTCCGAGGAAGCGCGCAACATCACGCGCGCCCTGGTGACGCCGGTGCGCAACCGGCTCATCGCCCTGTTGAGAGAGGCGATGCCGGAGCTGGACGAGCACAGCTTCTTCCTGGCGATGACGATTGTCCTCGGCGCCTATCTCTACCCGCAGGCCTATGGCGAGCGCCTCGCCACGATCATGGATATCGATCTCGGCACCTTCGATTGGCACAAGGCCAGTCAGACATTGGCGAACCTCATCAGCGGTGGGCTGGCCTGA
PROTEIN sequence
Length: 219
MSDQTAVSKASKARPVPDQSSRARFLEAADDQFILHGYDGCTIRAIAAQAGTSLASLSRNWTSKRHLFEEVFERHFAPIHAAQNASFDALERVGNAGVRDIIQAFFDSALSRSGSAGENRKSHMVYCCALTDPSEEARNITRALVTPVRNRLIALLREAMPELDEHSFFLAMTIVLGAYLYPQAYGERLATIMDIDLGTFDWHKASQTLANLISGGLA*