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cn_combo_scaffold_9477_3

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 1300..2094

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ79_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 264.0
  • Bit_score: 445
  • Evalue 5.20e-122
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 264.0
  • Bit_score: 443
  • Evalue 3.20e-122
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:BAK67249.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 264.0
  • Bit_score: 443
  • Evalue 1.60e-121

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
TTGAAGCGCACCCATCTTCCCCTCAATGGCCTGCGCGTGTTCGATGCGGCGGCCCGGCACCTCTCCTTCACGCGCGCGGCCGATGAGCTGGCGGTGACGCCGGCGGCTGTCGGCCAGCAGATCCGGGCGCTGGAGGACATGCTTGGCGTCGTGCTTTTCCGCCGAACGCCCCGCGGGTTGGAACTGACGCCGGAAGCGGAAGCCGGTCTGCCGGCGCTGCGTAGTGCCTTCCTGGAGCTGGAGGAGTCCGTTCGGGCGATGCAGGCCGGGCAGAGCTCGCAGCACCTGACCATCGCTGCCCCGCGAGACCTGACCGCCAAGTGGCTGCATGAGCGGCTGGCGAGCTATGCGCTCAGCGAGCCGGACCTGCAGTTCCTGCTCGTCGCGGCCGATGAGGCGCTCGACTTCACCGAAGCCAATCTCGACGTCGCGATCCGCCTGGCGGACGGGCCGGGCGAGCATGAAGGCCTGGCGTTGGGGGAGGCGCGGTTCGTCACCGTGGCCGCGCCGGACGGCAAGGGCGTGGACGCGCCGATTGCCTGGCCGGGCTGCCCGGTCGAGGATGGCAAGGCCATCATGCGGGTGGCGGATGCGGGCCTGGCCATTGATGCGGCGGCGAGCGGTTTCGGTCGGGCCTGCGTGCCCGAGCTGCTGGCGCGGGCAGACATCGCCGCCGGGCGCGTTGCGCCGGTTGGCGATGGGCGCGGTGGTCTCGGTTACTGGCTCATCGCGCCGCTGCCGCAGTGGCGGCAGAAGAAGGTGAAGGCCCTCGTCGCCGCGCTATCTGGAAACTAA
PROTEIN sequence
Length: 265
LKRTHLPLNGLRVFDAAARHLSFTRAADELAVTPAAVGQQIRALEDMLGVVLFRRTPRGLELTPEAEAGLPALRSAFLELEESVRAMQAGQSSQHLTIAAPRDLTAKWLHERLASYALSEPDLQFLLVAADEALDFTEANLDVAIRLADGPGEHEGLALGEARFVTVAAPDGKGVDAPIAWPGCPVEDGKAIMRVADAGLAIDAAASGFGRACVPELLARADIAAGRVAPVGDGRGGLGYWLIAPLPQWRQKKVKALVAALSGN*