ggKbase home page

cn_combo_scaffold_9477_8

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 5784..6635

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain-containing protein, AraC-type n=1 Tax=Acidovorax sp. CF316 RepID=J0KH96_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 30.3
  • Coverage: 287.0
  • Bit_score: 136
  • Evalue 5.50e-29
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJE50573.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 30.3
  • Coverage: 287.0
  • Bit_score: 136
  • Evalue 7.70e-29
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 29.6
  • Coverage: 287.0
  • Bit_score: 131
  • Evalue 3.80e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGGCTGCCGCCCTGCGTTTCTCGACTGAGGGAATGCGACCTAGCGACCGATTGCCGTTCTGGAATGCCGGATCGGTGGCGATCGGCGGAGTCGAAGCGGATGCGCTGGCGGACTCGCCGTTCAGCGGCACCGTCGTTCGCCGCACGCTCGGTGCCGCGACCGTGTTCGGCATGACCACCACGCCGCATCGTGCTGCCTGGACGACGCGCCTCATTCGCCGCGCCAGCGCTGAATTGCCGCTACGCCTGTGCTTCCAGCAGCGCGGTCGGACGGTGTTGCTGGGGGATGGCGCCGAGCATGTCGTCGGTCCGGGCCATTGGTTCCTGGCCGACGGGCGCCGGCCCTATGTGTCGGTCCATCCTGAGCCTTCGCGCAAGATCGCGCTGCAAGTGCCGATCGACCGGTTCGACAAGGCAGAGCGGGATGCGATCCGCCGGATGGCGGGTGGATTTCCGGTCGATGGCGGGATCGCGCGGATGCTGGAGGCGTGTCTCGACATCGCGCTTGCGGACGAGACGTCTCGCGACGAGCGGCTGGACGGTGATCTCGGTGAGACGTTGATCGATTTCTTCCGCCTGATGATCCGGGAGAAACAGGCTGAGTCCAGCCCCGTCTCGATGCGCGAACTGACGCAGGACCGCATCCGCTCCTATGTGCGGCGGAACCTGAGCAACCCGGACCTGTCCGTGGAGATGATCGCGCAGGCGATGAAATGCTCCAAGCGCTACATCCACAAGCTGTTCCGGGGTGATCAGACGATCAGTGAATATATCTGGGCGCTGCGGCTCGACCAGTGCCGGGCGATCCTGAGCGAGCCGGGGGGCGGCGAGATCACGCTCACCCAGTTGGCC
PROTEIN sequence
Length: 284
MAAALRFSTEGMRPSDRLPFWNAGSVAIGGVEADALADSPFSGTVVRRTLGAATVFGMTTTPHRAAWTTRLIRRASAELPLRLCFQQRGRTVLLGDGAEHVVGPGHWFLADGRRPYVSVHPEPSRKIALQVPIDRFDKAERDAIRRMAGGFPVDGGIARMLEACLDIALADETSRDERLDGDLGETLIDFFRLMIREKQAESSPVSMRELTQDRIRSYVRRNLSNPDLSVEMIAQAMKCSKRYIHKLFRGDQTISEYIWALRLDQCRAILSEPGGGEITLTQLA