ggKbase home page

cn_combo_scaffold_9514_5

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 6412..6777

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator n=1 Tax=Sphingobium xenophagum RepID=UPI00035C7397 similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 83.0
  • Bit_score: 157
  • Evalue 9.90e-36
winged helix family two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 83.0
  • Bit_score: 138
  • Evalue 5.10e-30
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 83.0
  • Bit_score: 134
  • Evalue 1.50e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Sphingopyxis_65_24 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGAAAATCCGTCACAAGGTGCTGATCGTCGATGACGAGCCGCATATCCGCAAGCTGATCCAGGTCGCGCTGTCGCGCGCCGACTATGCGACCGTCGAAGCGGAGAATGCGCGAGAGGCGCTGGAAATGCTTAAGAACGAACGCCCAGACATCAGCCTTCTGGATCTGGGTTTACCCGACCGGGACGGGCTGGAACTGGTGCCGCTGTTCAAGCAGCAGTCCGATACGACGCTCATCATCGTGNNNNNNNNNNNNNNNNNNNNNNNNGCCGCTGTTCAAGCAGCAGTCCGATACGACGCTCATCATCGTGTCCGCCCGCGACGCGACCGACCAGAAGGTGACGGCGCTGGACCTTGGGGCGGATGA
PROTEIN sequence
Length: 122
MKIRHKVLIVDDEPHIRKLIQVALSRADYATVEAENAREALEMLKNERPDISLLDLGLPDRDGLELVPLFKQQSDTTLIIVXXXXXXXXAAVQAAVRYDAHHRVRPRRDRPEGDGAGPWGG*