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cn_combo_scaffold_9548_1

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 472..2634

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VHK9_CAUST similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 719.0
  • Bit_score: 1049
  • Evalue 0.0
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 715.0
  • Bit_score: 1104
  • Evalue 0.0
  • rbh
TonB-dependent receptor {ECO:0000313|EMBL:AJP74495.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 715.0
  • Bit_score: 1104
  • Evalue 0.0

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2163
ATGCAAACCGAGTTTGCTGAGTTTCTGGCGACCGCGCGTCGCCCAATGCGCACATGGATGCTGAGCTGTGCCGCAACGCTGGCTCTGGCCGCAGGGGCTGTGCCGGCTGTCGCGCAAGAGGCCGACGAGGGCGAAGGCCAATCGCAAGATATCATCGTCACTGCGCTCAAATCTGGTGAGCAGAAGCTCGATCGTACGCCAATCGCGATTCAGGCCTTTTCCGATGAAACACTTCAAACGCGCGGGATCAAGGACGGGTCGGATCTCATCCAGATGATCCCCGGTGCGTCGCAAGCGCAGGAGATCGGTGCCGGTTATCGTATCTTTTCCTTCCGTGGCTCCGGCGCAGGCGGTCCGATCGGTGACGGGATGATCGGCTATTATCTCGACGACACGCCGTTCGGGATTCCCAACAACCAGTCGGCGCCGCCCGTCCAATATTTCGACATTGAGCGCGTCGAGGTCCTGCGTGGCCCCCAGGGCACGCTCTATGGGCAGGGGTCGATGGGTGGCACCATCATTTATCGCACCAAGAACCCGAGCCTGTCGAAGATCGACATGGCCGGAGACTTCGAACTTTCGAACACGGCTGATTCCGCGAAAATGAACTATCGGGCGGCAGCCGCCGTCTCGCTTCCGCTCGTGACCGACAAACTCGGCATTCGCGTCAGTGGTGGATATGATTATCGCGCTGGCTACAACGACATCTATCAGGGCGCACCGGTCGGGACGCCTTACAAGACCGACGCAAACAATGTCGTTTCCAAGGATATTCAGGCCGTTGTGCTCTGGCAGCCCAGCGACCGCGCGACGCTTCGTCTGCGCGCCTGGCACTTCAGCATCGATCAGGATTATCTGAATGTCATGAATTCGGTCGATCCGCCTTATGCGGCGTATCAGGGCCCGATCAACGGATACGACAAGCGCAGCGCCAACTATTATTCGGGTACGTTCACCTACGATCTGGGTGATCTTACGCTCACCAATGCGACTGCCTATCAGGAATCCAGGCCCGGTGGGTTCGGCGTCGCTCTGAACCTGGGGCCGCCGCTAGGCATCGGCCTTCTCGTCAATGGCGGGGATGCTGACAGCTTCGTGAATGAGTTCCGCCTCGCGACGTCGGGCACAGGCCCGTTCCACTGGGTGGGCGGCGCCTTCTATCAAAAGGCTCGGGGTCTCTACACTTTCAACATCAACTTCCCGACGCTCACGATTGCCGGGCGAACGATGACGCGGACCGAGAACTATTCGGTTTTTTCCGAACTCAGCTACGAGCTGCTCGACGGCAAGCTCGTTCCGCTGGTCGGCTTCCGTTACTTCAACGACAAGCGGAAGTCCGAGTCCGTGTCCAACGGCGTACCCGTCAACAGCGCAGCCAACCCGGACGCTTTCACCTGGCGTGTGAACCTGGCTTATTATGCCACGCCGGACTGGATGTTGTTCTTCAACGCAGGCACCGGTTTCCGCAGCGGTATCTTGCAATCGCGCGCGCAGGCTGATGCAGTGATAGCGGACGGTGTGCCGAGCGACATTTCGCTGACGCCGGACAAGCTGCGCAACATGGAAATTGGCCTCAAGGGCTCGCTCGCAGACGGGAAGGTCCGTGTTGCGACCAGTCTGTACGACATCAAATACACGAATCTCCAGAGCGCCTTCAACACGTCGATCGGCCTTGCCGCCTTCGCCAATCTGGGCGACGCCAAGACGCAAGGCTGGGATATCGAACTGGCATGGGATACGCCGATCCGGGGCCTGACGCTGAACGTGATCGGTAACGTGAACTCTTCCGAGTTCACCAACGTCATTCCAGCCTTTGCCGGCGCCAATCCGCGGGTCGCGGCCGGGCAGCGGCTCCTGAACACGCCCCCCTTCAATTGGCGGTTCGACGCGACCTACGATCGCAAATTCGGCAACATCTCGGTCTTCGGAAACGTCTCGGCGACGATGGTCGGCCGCACGCGCAATGGCGACGCGACGGTCAACACCATCAATCCCTATCAGCTCTTCCGTGCGAGCGCGGGCGTCCGCTTCGATCACTTCGAGCTGAGGGCCTTTGCGGAAAACCTCTCCGACGAGCGGGGACCAACGGCGGCTAACGGTCCGACGCTGCTTGCCGGCCCGAGGCCGCGGACGATCGGCCTTGGCCTGAGAGTGGAATATTAA
PROTEIN sequence
Length: 721
MQTEFAEFLATARRPMRTWMLSCAATLALAAGAVPAVAQEADEGEGQSQDIIVTALKSGEQKLDRTPIAIQAFSDETLQTRGIKDGSDLIQMIPGASQAQEIGAGYRIFSFRGSGAGGPIGDGMIGYYLDDTPFGIPNNQSAPPVQYFDIERVEVLRGPQGTLYGQGSMGGTIIYRTKNPSLSKIDMAGDFELSNTADSAKMNYRAAAAVSLPLVTDKLGIRVSGGYDYRAGYNDIYQGAPVGTPYKTDANNVVSKDIQAVVLWQPSDRATLRLRAWHFSIDQDYLNVMNSVDPPYAAYQGPINGYDKRSANYYSGTFTYDLGDLTLTNATAYQESRPGGFGVALNLGPPLGIGLLVNGGDADSFVNEFRLATSGTGPFHWVGGAFYQKARGLYTFNINFPTLTIAGRTMTRTENYSVFSELSYELLDGKLVPLVGFRYFNDKRKSESVSNGVPVNSAANPDAFTWRVNLAYYATPDWMLFFNAGTGFRSGILQSRAQADAVIADGVPSDISLTPDKLRNMEIGLKGSLADGKVRVATSLYDIKYTNLQSAFNTSIGLAAFANLGDAKTQGWDIELAWDTPIRGLTLNVIGNVNSSEFTNVIPAFAGANPRVAAGQRLLNTPPFNWRFDATYDRKFGNISVFGNVSATMVGRTRNGDATVNTINPYQLFRASAGVRFDHFELRAFAENLSDERGPTAANGPTLLAGPRPRTIGLGLRVEY*