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cn_combo_scaffold_10638_2

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 1477..2643

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1301087 species="Bacteria; Proteobacteria; Alp similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 388.0
  • Bit_score: 759
  • Evalue 2.50e-216
rnd; ribonuclease D (EC:3.1.26.3) similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 388.0
  • Bit_score: 709
  • Evalue 4.70e-202
ribonuclease D n=1 Tax=Sphingobium xenophagum RepID=UPI0002E06B20 similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 388.0
  • Bit_score: 773
  • Evalue 9.30e-221

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGCAAATCCATCCGCTGATTACCGACAGCAAGACACTTTCCGATTTCTGCGCCCGCATCGCCAAATCCCCCTATGTCGCCATCGACACGGAATTCATGCGCGAAAACAGCTATTGGCCCGAACTCTGCCTGATCCAGGTGGCCGACGCGGACGAAGCCGCCGCCATCGACCCAAAGGCGCCGGGCATCGACCTGAAGCCCCTGCTCGACCTGATGGTCGACAATGAGGATGTGCTGAAAATCTTTCATGCCGGCGGACAGGACATAGAGATTGTCTATAATCTGACCGGCAAGACCCCGCACCCGATGTTCGATACCCAGATTGCGGCGATGGCATTGGGCCTTGGCGAGCAGATCGGCTATGGCAATCTGGTCGAGGCGTGGCTGGGCGTACAGCTGGACAAGGGCGCGCGCTTTACCGACTGGGCGCGCCGCCCGCTCGACAAGCGCCAGATCGACTATGCCATCGGCGACGTCACCTATCTGATCCAGATTTTCCCCAAGATGCTGGAAGAGTTGCGCAAGACCGGGCGTGGCGACTGGCTGGACCAGGAAATGGAGCGGATCAGCAATCCCAGCCATTATGAAACGCTGCCCGAAGATGCGTGGAAGCGCGTCCGCATCGCCAGCAAGAAAGCCGATGTGCTGGGTCGCCTGAAAGCGCTGGCGGCATGGCGCGAGATCGAGGCGCAGGACAAGAATCTGCCGCGCGGCCGCATAGTCAAGGATGAGACGCTGGCCGACATTGCCAGCCATCCGCCGCGCACGCAGGATGATCTGGGCAAGGTGCGCGGCCTGTCCGTGACCTGGCGCACCAATGACATCGGCGCGCGGTTGATGGCGGCGCTGGGCAAGCAGCAGCCGCTCAGCAAAGATGAAATGCCCGACCGGGAGCCGCGGCGTCCGGGGCTGGGCAAGGATGGCGCTCTGGTCGCGGACCTGCTCAAGCTGCTGCTCAAGATCCGGTCGCGCGACATCAATGTCGCATCGCGCCTGCTGGCGCGCAGCGATGACATTGAAGCGCTGGCGGCGGGCGTGCGGAACGACCTCTCGATCCTGGAGGGGTGGCGTTACGAACAATATGGCCGCGACGCGGTCGATCTGGTCGAGGGGCGGCTGGCCTTTGCGGTCAAGGGCGGTCGGCTGAAGATGACGCGGACGGAGTAA
PROTEIN sequence
Length: 389
MQIHPLITDSKTLSDFCARIAKSPYVAIDTEFMRENSYWPELCLIQVADADEAAAIDPKAPGIDLKPLLDLMVDNEDVLKIFHAGGQDIEIVYNLTGKTPHPMFDTQIAAMALGLGEQIGYGNLVEAWLGVQLDKGARFTDWARRPLDKRQIDYAIGDVTYLIQIFPKMLEELRKTGRGDWLDQEMERISNPSHYETLPEDAWKRVRIASKKADVLGRLKALAAWREIEAQDKNLPRGRIVKDETLADIASHPPRTQDDLGKVRGLSVTWRTNDIGARLMAALGKQQPLSKDEMPDREPRRPGLGKDGALVADLLKLLLKIRSRDINVASRLLARSDDIEALAAGVRNDLSILEGWRYEQYGRDAVDLVEGRLAFAVKGGRLKMTRTE*