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cn_combo_scaffold_10844_4

Organism: CN-SCN_Sphingobium_10x

partial RP 17 / 55 BSCG 15 / 51 ASCG 2 / 38 MC: 1
Location: 4569..6221

Top 3 Functional Annotations

Value Algorithm Source
histidine kinase n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039DACE6 similarity UNIREF
DB: UNIREF100
  • Identity: 34.6
  • Coverage: 257.0
  • Bit_score: 145
  • Evalue 1.30e-31
Histidine kinase {ECO:0000313|EMBL:KFG91064.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidov similarity UNIPROT
DB: UniProtKB
  • Identity: 29.2
  • Coverage: 569.0
  • Bit_score: 163
  • Evalue 1.10e-36
putative signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 255.0
  • Bit_score: 139
  • Evalue 2.70e-30

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Taxonomy

Sphingobium herbicidovorans → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1653
GTGCAGACCGCCGACAAGGGAGACATATTGGGCAAGCGCCCGCTCCTCCTTTTTCAGGCCCTGACGCGCGTCATCATCGCCAGCGCTGTCGTTTTCCAGGCGCGCGCCCTGCCGCTCCCGCCCAATGTCACCTTCATCCTGCAGGGGTTCATCCTGTCCTGGGCGTCGATCGCCCTGATCGGGTTGTTTCTCGATTTGCCGAAGAGCCTGCCGGAGTTTGTCGCCGTCTTGCTGCTCGACTGGCTTTTTGCAGGGTGCACGCTCCTCCTCGGAGAGCCGGTGGCCGGTTTCCTGCTCCTGCTTTTCAGCGAGGTCGGGTTAAGAAGCATTGGCTGGCGCTGGCGACCGACCGCGACGGTGGCCGTCGCAGCGCTCCTGCTCGTGTGCGCGGGCGCCGCTCAACACTATTGGCAGATGAACTGGATGGATTTGCAGGTTCTGCCGTCGGACATTCCGCTCTGGGCTGCGGCATTGATCCTCTACAGCGTGACGCAGCAAATGTCCGCGCGCCGCGAGGCAAGCCTTGAAAGGCTCAGCGGAGACATCTGGATCGACCCGATCCTCGCGTCCGGCCAGCCCTTTTCCTCTGATTTCACCAAGTGGATCGAGCAACTGGCCCGCCTGTTCGGCGAGAAGCGATCTCTCTGCCTGCTGGTCCTTGCCCAAAAGGGCGGGACCGTTCGCACTTTCAGCAACCTGCCGACCGAACGGTTCCACACAGAACTCGTCCAGGCTCTGGCGGACCCGCGCGATCATTGGCCGGAGCAACTGCAGGTCATGCGGGATCGCGAAGCTGGCAGAGGGCAGAGCGACAGCGATCAGAGCCTGCGGCAACTGCACGTTCTGTCCCTGCTCGATCATCGGATCATGATGGCCCGGCATTTCCGCCTCGGGCACAGGAACGGCCTGTTGCTGATCGCGCATGATCAGCCCAACGATGCGATCCTGACGCAGGAAGCGATCAAGATCGACCAGGCCCTCGACGATGTGACTGCGCGCATCGATCGCACCATGGAGATGCGGCGCGCGTTTCTGACCGAGGCCCGCGAAGTGGCCCGACGCGACCTGCATGATGGCGTGCTTCAGTCGCTCGCGGCTTTGCGCATGCGGTTGCTCACGATCATTCAGTCCGAAAATCTTACCCCGGCGGCGAATGCCGAAATTCGCACGACGGCGGACATCATCGCGCTGGAACAGGCGCGGCTGCGCTCGCTGCTGGACGAGACCGTCGACGCGGACCAGCCGGTCAATCTCGTCGAAGCCCTGCGGCTGTGCGTCAAGACGGCGGCCCTGCAATGGGAGATCGAGGTGGAGTTTGTGAGCGACGAGACCGCCGTGCCGATGCACCGGGAATCGGCGGGCAATGTTGAATATCTTGTGAGGGAGGTCGTCGCCAACGCGTCGCGCCACTCCGGCTCCAAGCATTTGCGCTGCTCGCTGGCCTTGCGCGATGACAATCTGATCATCAGCCTGATGGACCTCTCGGCCACGCCGATGGCCCCGCTCGGCGATATCAACGATGGACCGCTTTCCTCGCAGTCGCTGCGACAACGACTCGCGTTGGTCAACGGTCGCGCCTATTCCGAAGGCTTGCAAACGGGCACGTTGCTCGCTGTCGCCATTCCGCTCGTTTATGATGAGGCTGACCTATGA
PROTEIN sequence
Length: 551
VQTADKGDILGKRPLLLFQALTRVIIASAVVFQARALPLPPNVTFILQGFILSWASIALIGLFLDLPKSLPEFVAVLLLDWLFAGCTLLLGEPVAGFLLLLFSEVGLRSIGWRWRPTATVAVAALLLVCAGAAQHYWQMNWMDLQVLPSDIPLWAAALILYSVTQQMSARREASLERLSGDIWIDPILASGQPFSSDFTKWIEQLARLFGEKRSLCLLVLAQKGGTVRTFSNLPTERFHTELVQALADPRDHWPEQLQVMRDREAGRGQSDSDQSLRQLHVLSLLDHRIMMARHFRLGHRNGLLLIAHDQPNDAILTQEAIKIDQALDDVTARIDRTMEMRRAFLTEAREVARRDLHDGVLQSLAALRMRLLTIIQSENLTPAANAEIRTTADIIALEQARLRSLLDETVDADQPVNLVEALRLCVKTAALQWEIEVEFVSDETAVPMHRESAGNVEYLVREVVANASRHSGSKHLRCSLALRDDNLIISLMDLSATPMAPLGDINDGPLSSQSLRQRLALVNGRAYSEGLQTGTLLAVAIPLVYDEADL*